DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and Aldh-III

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_724562.2 Gene:Aldh-III / 45398 FlyBaseID:FBgn0010548 Length:564 Species:Drosophila melanogaster


Alignment Length:480 Identity:116/480 - (24%)
Similarity:193/480 - (40%) Gaps:78/480 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 EYKTPEVRYQVMPHDHQHKLASFYYADKKL--IEKAIKTAVETQPKWDRVSIADRLKIWEKAADL 143
            :.:.||   |:.......::|:|   |..|  ...|..:.......:.|..:.:.|:.:|:..:.
  Fly    51 QQQQPE---QLQSESESDRMANF---DDTLQRARLAFSSGKTRNVSFRRKQLENLLRCYEEHENE 109

  Fly   144 MATTYRQDLNAATMLGQSKTAIQAEIDSAAELIDFIRMNAYFLKE-VTKYQPISENIKVTKNSLR 207
            :.:....||....   |....::.|.     :.:.||...:.|.| |...:|....:.:..:...
  Fly   110 IISALEADLRRPK---QESLIVETEF-----MKNDIRHILFQLDEWVQSEKPPKSFVNMMDDVQI 166

  Fly   208 YRGIDGFIAAVSPFNFTAIGGNLSYTPA----LMGNGVLWKPSDTAMLSNWIIFKIMREAGVPDG 268
            |....|.:..:..:|:..   .|...|.    ..||.|:.|||:.|  :|...|       :.|.
  Fly   167 YNDPFGVVLVIGAWNYPL---QLLLVPVASAIAAGNCVVIKPSEIA--ANCAKF-------IADV 219

  Fly   269 VVNFVPAD-GPVF--GDTITA---SPHLAGINFTGSVPTFNRLWKQVGNNIDNYVNFPRLTGECG 327
            :..::..| .||.  |.:.||   :.....|.:|||    .|:.|.:....:.|:.  ..|.|.|
  Fly   220 IPKYLDNDCYPVVCGGPSETAELLNQRFDYIFYTGS----TRVGKIIHAAANKYLT--PTTLELG 278

  Fly   328 GKNFHFIHASADVESVVTSTIRSAFEYCGQKCSA-----CSRMYVPESLWPQIKEGLVCEA---A 384
            ||:..:|..|.|:.:.|...:......|||.|.|     ||:         :::|..:.||   .
  Fly   279 GKSPCYIDKSVDMRTAVKRILWGKLINCGQTCIAPDYILCSK---------EVQEKFIVEAKDVL 334

  Fly   385 KLKIGDVQDFSSFTSAVIDDKAFKRITGYIEHAKKSPNLEILAGGTYSDSKGYFVNPTIVLSKDP 449
            |...|:....|...|.||:...|:|:.|.::..:      :..||.| |:...|:.|||::....
  Fly   335 KEWYGENIQSSPDLSRVINANNFQRLLGLMKSGR------VAVGGNY-DASERFIEPTILVDVKE 392

  Fly   450 KDRIMTEEIFGPVLSIYVYKESDLLETMKLVHTSTKFALTGAVFGQDEDFVKCALQEFKMA--AG 512
            .|.||.||||||:|.|:..:.:  .:.:|.::...| .|...||......||    ||:.:  :|
  Fly   393 TDPIMEEEIFGPILPIFNVESA--YDAIKFINAREK-PLVIYVFSNSNKLVK----EFRRSTTSG 450

  Fly   513 NFYINDKSTGSVVGQQPFGGGRMSG 537
            .|..|:......|...||||..|||
  Fly   451 GFSSNETIMHCGVDVLPFGGVGMSG 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 116/480 (24%)
Aldh-IIINP_724562.2 ALDH_F3AB 72..515 CDD:143450 110/453 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454112
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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