DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and aldh3a2b

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001315147.1 Gene:aldh3a2b / 447920 ZFINID:ZDB-GENE-040912-103 Length:490 Species:Danio rerio


Alignment Length:524 Identity:112/524 - (21%)
Similarity:197/524 - (37%) Gaps:149/524 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 SKERKALEQALK----GTASSCEDIPIVIGGKEYKTPEVRYQVMPHDHQHKLASFYYADKKLIEK 113
            |:|:||:|:|.|    |.:.|.          ||:..:::          .|..|....:|.|.:
Zfish     2 SREQKAVERARKAFFTGRSKSL----------EYRISQLK----------NLQRFMQERQKEIAE 46

  Fly   114 AIKTAVETQPKWDRVSIADRLKIWEKAADLMATTYRQDLNAATMLGQSKTAIQAEIDSAAELIDF 178
            |:|               ..||..|....|..|           ||     :::||:.|.:.   
Zfish    47 ALK---------------KDLKRSEFGTSLYET-----------LG-----VESEINLALKK--- 77

  Fly   179 IRMNAYFLKEVTKYQPISENIKVTKNSLRYRGID-GFIAAVSPFNF---TAIGGNLSYTPALMGN 239
                   |||....:|:::::....:.:..:... |.:..:..:|:   ..:|..:....|  ||
Zfish    78 -------LKEWAAPRPVNKSLMTISDQVYIQPEPLGVVLIIGAWNYPWAVTVGPLVGAIAA--GN 133

  Fly   240 GVLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFNR 304
            ..:.|||:.:..::    |:|.|         |:|         :.....|..: .||.|.....
Zfish   134 AAVIKPSEVSAHTS----KVMEE---------FLP---------LYLDKELYPV-VTGGVKETQE 175

  Fly   305 LWKQ-------VGNNIDNYV-------NFPRLTGECGGKNFHFIHASADVESVVTSTIRSAFEYC 355
            |.||       .||.:...:       :....|.|.|||:..:|....|:...........:..|
Zfish   176 LLKQRFDHIFYTGNGMVGKIIMEAAAKHLTPTTLELGGKSPCYIDKDCDLTIACRRIAWGKYSNC 240

  Fly   356 GQKCSACSRMYVPESLW--PQIKEGLVCEAAKLKIGDVQDFSSFT---------SAVIDDKAFKR 409
            ||.|.|      |:.:.  |.|::.::.|..|    ::::|  :|         ..:|:.:.|||
Zfish   241 GQTCIA------PDYILCDPSIQDRVIEEIKK----NIKEF--YTENPQKCPDYGRIINQRHFKR 293

  Fly   410 ITGYIEHAKKSPNLEILAGGTYSDSKGYFVNPTIVLSKDPKDRIMTEEIFGPVLSIYVYKESDLL 474
            :...:|.:      .|...|.:::::.| :.||::....|..::|.||||||:|.|......|  
Zfish   294 LMSLMEGS------SIAVSGEHNEAECY-IAPTVLRDVKPDAKVMQEEIFGPLLPIVTVNSVD-- 349

  Fly   475 ETMKLVHTSTKFALTGAVFGQDEDFVKCALQEFKMAAGNFYINDKSTGSVVGQQPFGG------G 533
            |.:|.::...| .|...:|..|:..:...:.|  .::|....||......|...||||      |
Zfish   350 EAIKFINQRDK-PLALYIFSSDKKLIDRMIAE--TSSGGLMANDCLMHFSVSSLPFGGVGDSGMG 411

  Fly   534 RMSG 537
            |..|
Zfish   412 RYHG 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 112/524 (21%)
aldh3a2bNP_001315147.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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