DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment P5CDh1 and aldh2.2

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_998466.2 Gene:aldh2.2 / 368239 ZFINID:ZDB-GENE-030326-5 Length:516 Species:Danio rerio


Alignment Length:561 Identity:151/561 - (26%)
Similarity:240/561 - (42%) Gaps:85/561 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRMMRSSS----SRCSSLQQSLLKSSTRCLGSVIPDLKLKDFPIANEPILGYLKDSKERKALEQ 61
            |||.:.|.:    .|.||.|.|.:.:.     :|.||:......|.||     ..|:..:|....
Zfish     1 MLRTVLSRAFPQVCRISSCQHSTIPAP-----NVQPDVHYNKIFINNE-----WHDAVSKKTFPT 55

  Fly    62 ALKGTASSCEDIPIVIGGKEYKTPEVRYQVMPHDHQHKLASFYYADKKLIEKAIKTAVET----Q 122
            ....|.                      :::.|..:        .||..::||:|.|.:.    .
Zfish    56 INPATG----------------------EIICHVAE--------GDKADVDKAVKAARDAFKLGS 90

  Fly   123 PKWDRVSIADRLKIWEKAADLMA--TTYRQDLNAATMLGQSKTAIQAEIDSAAELIDFIRMNAYF 185
            | |.|:..:.|..:..:.||.:.  ..|..:|.  |:......|:...:|...    .::...|:
Zfish    91 P-WRRMDASQRGLLLSRLADCIERDAAYLAELE--TLDNGKPYAVSFSVDVPM----VVKCMRYY 148

  Fly   186 LKEVTKYQPISENIKVTKNSLRYRGID--GFIAAVSPFNFTAIGGNLSYTPAL-MGNGVLWKPSD 247
            .....|::  .:.|.:..|...|...:  |....:.|:||..:.......||| .||.|:.|.::
Zfish   149 AGWADKWE--GKTIPIDGNYFCYTRHEPIGVCGQIIPWNFPLLMQAWKLGPALATGNTVVMKVAE 211

  Fly   248 TAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFNRLWKQVGNN 312
            ...|:...|..:::|.|.|.||||.||..||..|..|.:...:..:.||||.        .||:.
Zfish   212 QTPLTALYIASLIKEVGFPAGVVNIVPGMGPTAGAAIASHMDVDKVAFTGST--------DVGHL 268

  Fly   313 I---DNYVNFPRLTGECGGKNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPESLWPQ 374
            |   .:..|..::|.|.|||:.:.|.:.|::|..|..:..:.|...||.|.|.:|.:|.||::.:
Zfish   269 IQRASSASNLKKVTLELGGKSPNIILSDANMEEAVEQSHIALFFNQGQCCCAGTRTFVQESIYDE 333

  Fly   375 IKEGLVCEAAKLKIGDVQDFSSFTSAVIDDKAFKRITGYIEHAKKSPNLEILAGGTYSDSKGYFV 439
            ..|..|..|....:||..|.::.....:::..||::.|||...|:. ..:::.||..:..:|||:
Zfish   334 FVERSVERAKNRIVGDPFDLNTEQGPQVNEDQFKKVLGYISSGKRE-GAKLMCGGAPAAERGYFI 397

  Fly   440 NPTIVLSKDPKD--RIMTEEIFGPVLSIYVYKESDLLETMKLVHTSTKFALTGAVFGQDEDFVKC 502
            .||:.  .|.||  .|..|||||||:.|..:|  .|.|.::..:.| |:.|.||||.||.|  |.
Zfish   398 QPTVF--GDVKDDMTIAREEIFGPVMQILKFK--SLEEVIERANDS-KYGLAGAVFTQDID--KA 455

  Fly   503 ALQEFKMAAGNFYINDKSTGSVVGQQPFGGGRMSGTNDKAG 543
            ......:.||..:||..:...|  |.||||.:.||...:.|
Zfish   456 NYISHGLRAGTVWINCYNVFGV--QAPFGGYKASGIGREMG 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 139/517 (27%)
aldh2.2NP_998466.2 ALDH_F1AB_F2_RALDH1 30..510 CDD:143459 141/527 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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