DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and Aldh1b1

DIOPT Version :10

Sequence 1:NP_649368.2 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001011975.1 Gene:Aldh1b1 / 298079 RGDID:1306737 Length:519 Species:Rattus norvegicus


Alignment Length:498 Identity:132/498 - (26%)
Similarity:217/498 - (43%) Gaps:73/498 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 PEVRY-QVMPHDHQH--------------------KLASFYYADKKLIEKAIKTAVETQPKWDRV 128
            ||:|| |:..::..|                    .:|....||..|..:|.:.|......|.|:
  Rat    34 PEIRYNQLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDLAVRAAREAFRLGSPWRRM 98

  Fly   129 SIADRLKIWEKAADLMATTYRQDLNAATMLGQSKTAIQAEIDSAAELIDFIRMNAYFLKE----- 188
            ..::|.::..:.|||:... |..|.:...|...|...::.:....|:|...|..|.:..:     
  Rat    99 DASERGRLLNRLADLVERD-RVYLASLETLDNGKPFQESYVLDLDEVIKVYRYLAGWADKWHGKT 162

  Fly   189 ---------VTKYQPISENIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPAL-MGNGVLW 243
                     .|:::|:                 |....:.|:||..:.......||| .||.|:.
  Rat   163 IPMDGEHFCFTRHEPV-----------------GVCGQIIPWNFPLVMQGWKLAPALATGNTVVM 210

  Fly   244 KPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFNRLWKQ 308
            |.::...||...:..:::|||.|.||||.:...||..|..|.....:..:.||||....:.:.|.
  Rat   211 KVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKA 275

  Fly   309 VGNNIDNYVNFPRLTGECGGKNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPESLWP 373
            .|::     |..|:|.|.|||:...:.|.||::..|.....:.|...||.|.|.||.:|.||::.
  Rat   276 AGDS-----NLKRVTLELGGKSPSIVLADADMDHAVDQCHEALFFNMGQCCCAGSRTFVEESIYH 335

  Fly   374 QIKEGLVCEAAKLKIGDVQDFSSFTSAVIDDKAFKRITGYIEHAKKSPNLEILAGGTYSDSKGYF 438
            :..|..|.:|.|.|:|:..:..:.....:|.:.|::|.|||...:|. ..::|.||.....:|:|
  Rat   336 EFLERTVEKAKKRKVGNPFELDTQQGPQVDKEQFEKILGYIRLGQKE-GAKLLCGGERFGERGFF 399

  Fly   439 VNPTIVLSKDPKDRIMTEEIFGPVLSIYVYKESDLLETMKLVHTSTKFALTGAVFGQDED---FV 500
            :.||:..:.....||..|||||||..::.:|:   :|.:.....:|::.|..|||.:|.|   :.
  Rat   400 IKPTVFGNVQDDMRIAREEIFGPVQPLFKFKK---IEEVIQRANNTRYGLAAAVFTRDLDKALYF 461

  Fly   501 KCALQEFKMAAGNFYINDKSTGSVVGQQPFGGGRMSGTNDKAG 543
            ..|||     ||..::|  :...|....||||.:.||...:.|
  Rat   462 SQALQ-----AGTVWVN--TYNIVTCHTPFGGFKESGNGRELG 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_649368.2 ALDH_F4-17_P5CDH 41..563 CDD:143441 132/498 (27%)
Aldh1b1NP_001011975.1 ALDH_F1AB_F2_RALDH1 33..513 CDD:143459 132/498 (27%)

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