DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and Aldh1b1

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_001011975.1 Gene:Aldh1b1 / 298079 RGDID:1306737 Length:519 Species:Rattus norvegicus


Alignment Length:498 Identity:132/498 - (26%)
Similarity:217/498 - (43%) Gaps:73/498 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 PEVRY-QVMPHDHQH--------------------KLASFYYADKKLIEKAIKTAVETQPKWDRV 128
            ||:|| |:..::..|                    .:|....||..|..:|.:.|......|.|:
  Rat    34 PEIRYNQLFINNEWHDAVSKKTFPTVNPTTGEVIGHVAEGDRADVDLAVRAAREAFRLGSPWRRM 98

  Fly   129 SIADRLKIWEKAADLMATTYRQDLNAATMLGQSKTAIQAEIDSAAELIDFIRMNAYFLKE----- 188
            ..::|.::..:.|||:... |..|.:...|...|...::.:....|:|...|..|.:..:     
  Rat    99 DASERGRLLNRLADLVERD-RVYLASLETLDNGKPFQESYVLDLDEVIKVYRYLAGWADKWHGKT 162

  Fly   189 ---------VTKYQPISENIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPAL-MGNGVLW 243
                     .|:::|:                 |....:.|:||..:.......||| .||.|:.
  Rat   163 IPMDGEHFCFTRHEPV-----------------GVCGQIIPWNFPLVMQGWKLAPALATGNTVVM 210

  Fly   244 KPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFNRLWKQ 308
            |.::...||...:..:::|||.|.||||.:...||..|..|.....:..:.||||....:.:.|.
  Rat   211 KVAEQTPLSALYLASLIKEAGFPPGVVNIITGYGPTAGAAIAQHMDVDKVAFTGSTEVGHLIQKA 275

  Fly   309 VGNNIDNYVNFPRLTGECGGKNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPESLWP 373
            .|::     |..|:|.|.|||:...:.|.||::..|.....:.|...||.|.|.||.:|.||::.
  Rat   276 AGDS-----NLKRVTLELGGKSPSIVLADADMDHAVDQCHEALFFNMGQCCCAGSRTFVEESIYH 335

  Fly   374 QIKEGLVCEAAKLKIGDVQDFSSFTSAVIDDKAFKRITGYIEHAKKSPNLEILAGGTYSDSKGYF 438
            :..|..|.:|.|.|:|:..:..:.....:|.:.|::|.|||...:|. ..::|.||.....:|:|
  Rat   336 EFLERTVEKAKKRKVGNPFELDTQQGPQVDKEQFEKILGYIRLGQKE-GAKLLCGGERFGERGFF 399

  Fly   439 VNPTIVLSKDPKDRIMTEEIFGPVLSIYVYKESDLLETMKLVHTSTKFALTGAVFGQDED---FV 500
            :.||:..:.....||..|||||||..::.:|:   :|.:.....:|::.|..|||.:|.|   :.
  Rat   400 IKPTVFGNVQDDMRIAREEIFGPVQPLFKFKK---IEEVIQRANNTRYGLAAAVFTRDLDKALYF 461

  Fly   501 KCALQEFKMAAGNFYINDKSTGSVVGQQPFGGGRMSGTNDKAG 543
            ..|||     ||..::|  :...|....||||.:.||...:.|
  Rat   462 SQALQ-----AGTVWVN--TYNIVTCHTPFGGFKESGNGRELG 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 132/498 (27%)
Aldh1b1NP_001011975.1 PLN02466 13..510 CDD:215259 132/498 (27%)
ALDH_F1AB_F2_RALDH1 33..513 CDD:143459 132/498 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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