DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment P5CDh1 and Aldh5a1

DIOPT Version :10

Sequence 1:NP_649368.2 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_074042.1 Gene:Aldh5a1 / 291133 RGDID:621422 Length:523 Species:Rattus norvegicus


Alignment Length:494 Identity:118/494 - (23%)
Similarity:207/494 - (41%) Gaps:55/494 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 IGGKEYKTPEVRYQVMPHDHQHKLASFYYADKKLIEKAIKTAVETQPKWDRVSIADRLKIWEKAA 141
            :||:...|| ..:.|.......||.:...........|::.|.:....|..:|:.:|..:..|..
  Rat    53 VGGRWLPTP-ATFPVYDPASGAKLGTVADCGVPEARAAVRAAYDAFSSWKEISVKERSSLLRKWY 116

  Fly   142 DLMATTYRQDLNAATMLGQSKTAI---QAEIDSAAELIDFIRMNAYFLKEVTK-YQPISENIKVT 202
            |||  ...:|..|..:..:|...:   |.||..:|..::      :|.:|..: |..|.......
  Rat   117 DLM--IQNKDELAKIITAESGKPLKEAQGEILYSAFFLE------WFSEEARRVYGDIIYTSAKD 173

  Fly   203 KNSLRYRGIDGFIAAVSPFNFTA------IGGNLSYTPALMGNGVLWKPSDTAMLSNWIIFKIMR 261
            |..|..:...|..:.::|:||.:      :|..|:     .|..|:.||::....|...:.::..
  Rat   174 KRGLVLKQPVGVASIITPWNFPSAMITRKVGAALA-----AGCTVVVKPAEDTPYSALALAQLAN 233

  Fly   262 EAGVPDGVVNFVPAD---GPVFGDTITASPHLAGINFTGSVPTFNRLWKQVGNNIDNYVNFPRLT 323
            :||:|.||.|.:|..   ....|:.:...|.::.|:||||..|...|.....|::      .|::
  Rat   234 QAGIPPGVYNVIPCSRTKAKEVGEVLCTDPLVSKISFTGSTATGKILLHHAANSV------KRVS 292

  Fly   324 GECGGKNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPESLWPQIKEGLV---CEAAK 385
            .|.||.....:..||:|:..|...:.|.|...||.|...:|..|...    |.:..|   .||.|
  Rat   293 MELGGLAPFIVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRG----IHDSFVTKFAEAMK 353

  Fly   386 --LKIGDVQDFSSFTSAVIDDKAFKRITGYIEHAKKSPNLEILAGGTYSDSKGYFVNPTIVLSKD 448
              |::|:..:..:....:|::||.:::..::..| .:....::.||....|.|.|..||: ||..
  Rat   354 KSLRVGNGFEEGTTQGPLINEKAVEKVEKHVNDA-VAKGATVVTGGKRHQSGGNFFEPTL-LSNV 416

  Fly   449 PKDRI-MTEEIFGPVLSIYVYKESDLLETMKLVHTSTKFALTGAVFGQDEDFVKCALQEFKMAAG 512
            .:|.: :|||.|||:..:..:   |..|....:..:....|.|..:.||...:....::.::  |
  Rat   417 TRDMLCITEETFGPLAPVIKF---DKEEEAVAIANAADVGLAGYFYSQDPAQIWRVAEQLEV--G 476

  Fly   513 NFYINDKSTGSVVGQQPFGGGRMSG---TNDKAGGPHYI 548
            ...:|:....||  :.||||.:.||   ...|.|...|:
  Rat   477 MVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEYL 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_649368.2 ALDH_F4-17_P5CDH 41..563 CDD:143441 118/494 (24%)
Aldh5a1NP_074042.1 SSADH 66..516 CDD:188167 114/480 (24%)

Return to query results.
Submit another query.