DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and Aldh3a1

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_114178.1 Gene:Aldh3a1 / 25375 RGDID:2088 Length:453 Species:Rattus norvegicus


Alignment Length:411 Identity:98/411 - (23%)
Similarity:171/411 - (41%) Gaps:78/411 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 ATMLGQSK-TAIQAEIDSAAELIDFIRMNAYFLKEVTKY---QPISENIKVTKNSLRYRGID-GF 214
            |:.||::: |:...|:....|.:|..      :||:..:   :|:::..:..::.|...... |.
  Rat    49 ASDLGKNEWTSYYEEVAHVLEELDTT------IKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGV 107

  Fly   215 IAAVSPFNFTAIGGNLSYTPAL----MGNGVLWKPSDTA-----MLSNWI-------IFKIMREA 263
            :..:..:|:..   ||:..|.:    .||.|:.|||:.:     :|:..|       ::.::: .
  Rat   108 VLVIGAWNYPF---NLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVK-G 168

  Fly   264 GVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFNRLWKQVGNNIDNYVNFPRLTGECGG 328
            |||:              .|.........|.:|||......:......::      ..:|.|.||
  Rat   169 GVPE--------------TTELLKERFDHIMYTGSTAVGKIVMAAAAKHL------TPVTLELGG 213

  Fly   329 KNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPESLWPQIKEGLVCEAAKLKIGDVQD 393
            |:..::....|::..........|...||.|.|...:....|:..||.|       ||| ..::|
  Rat   214 KSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVE-------KLK-KSLKD 270

  Fly   394 F-------SSFTSAVIDDKAFKRITGYIEHAKKSPNLEILAGGTYSDSKGYFVNPTIVLSKDPKD 451
            |       |.....:|:|:.|:|:.|.|:      |.::..|||:..|..| :.|||::..||:.
  Rat   271 FYGEDAKQSRDYGRIINDRHFQRVKGLID------NQKVAHGGTWDQSSRY-IAPTILVDVDPQS 328

  Fly   452 RIMTEEIFGPVLSIYVYKESDLLETMKLVHTSTKFALTGAVFGQDEDFVKCALQEFKMAAGNFYI 516
            .:|.|||||||:.|...:  .|.|.::.::...| .|...||..:|..:|..:.|  .::|....
  Rat   329 PVMQEEIFGPVMPIVCVR--SLEEAIQFINQREK-PLALYVFSNNEKVIKKMIAE--TSSGGVTA 388

  Fly   517 NDKSTGSVVGQQPFGGGRMSG 537
            ||......|...||||...||
  Rat   389 NDVIVHITVPTLPFGGVGNSG 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 98/411 (24%)
Aldh3a1NP_114178.1 ALDH_F3AB 5..447 CDD:143450 98/411 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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