DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and Aldh1a1

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_038949786.1 Gene:Aldh1a1 / 24188 RGDID:2087 Length:520 Species:Rattus norvegicus


Alignment Length:492 Identity:140/492 - (28%)
Similarity:208/492 - (42%) Gaps:96/492 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 DKKLIEKAIKT---AVETQPKWDRVSIADRLKIWEKAADLM-------------------ATTYR 149
            ||..::||:|.   |.:....|..:..::|.::..|.||||                   |..|.
  Rat    75 DKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATIEAINGGKVFANAYL 139

  Fly   150 QDLN------------AATMLGQSKTAIQAEIDSAAELIDFIRMNAYFLKEVTKYQPISENIKVT 202
            .||.            |..:.||:       |.|..::..|           |:.:||       
  Rat   140 SDLGGSIKALKYCAGWADKIHGQT-------IPSDGDIFTF-----------TRREPI------- 179

  Fly   203 KNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPAL-MGNGVLWKPSDTAMLSNWIIFKIMREAGVP 266
                      |....:.|:||..:.......||| .||.|:.||::...|:...:..:::|||.|
  Rat   180 ----------GVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQTPLTALHMASLIKEAGFP 234

  Fly   267 DGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFNRLWKQVGNNIDNYV---NFPRLTGECGG 328
            .||||.||..||..|..|::...:..:.||||.        |||..|....   |..|:|.|.||
  Rat   235 PGVVNIVPGYGPTAGAAISSHMDVDKVAFTGST--------QVGKLIKEAAGKSNLKRVTLELGG 291

  Fly   329 KNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPESLWPQIKEGLVCEAAKLKIGDVQD 393
            |:...:.|.||::..|.......|.:.||.|.|.||::|.||::.:.....|..|.|..:|:...
  Rat   292 KSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVRKSVERAKKYVLGNPLT 356

  Fly   394 FSSFTSAVIDDKAFKRITGYIEHAKKSPNLEILAGGTYSDSKGYFVNPTIVLSKDPKDRIMTEEI 458
            ........||.:...:|...||..||. ..::..||....:||:||.||:..:...:.||..|||
  Rat   357 QGINQGPQIDKEQHDKILDLIESGKKE-GAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEI 420

  Fly   459 FGPVLSIYVYKESDLLETMKLVHTSTKFALTGAVFGQDED---FVKCALQEFKMAAGNFYINDKS 520
            ||||..|..:|..|  :.:|..:.:| :.|...||.:|.|   .|..|||     ||..::|...
  Rat   421 FGPVQQIMKFKSID--DVIKRANNTT-YGLAAGVFTKDLDRAITVSSALQ-----AGVVWVNCYM 477

  Fly   521 TGSVVGQQPFGGGRMSGTNDKAGGPHYILRWTSPQSI 557
            ..|  .|.||||.:||| |.:..|.|.:..:|..:::
  Rat   478 ILS--AQCPFGGFKMSG-NGRELGEHGLYEYTELKTV 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 140/492 (28%)
Aldh1a1XP_038949786.1 ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 140/492 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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