DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment P5CDh1 and Aldh5a1

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_766120.1 Gene:Aldh5a1 / 214579 MGIID:2441982 Length:523 Species:Mus musculus


Alignment Length:566 Identity:133/566 - (23%)
Similarity:223/566 - (39%) Gaps:108/566 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RSSSSRCSSLQQSLLKSSTRCLGSVIPDLKLKDFPIANEPILGYLKDSKERKALEQALKGTASSC 70
            ||.:|....|...||:..:...|..:|  ....||: .:|..|             |..||.:.|
Mouse    33 RSYASGPGGLHADLLRGDSFVGGRWLP--APATFPV-YDPASG-------------AKLGTVADC 81

  Fly    71 EDIPIVIGGKEYKTPEVRYQVMPHDHQHKLASFYYADKKLIEKAIKTAVETQPKWDRVSIADRLK 135
                        ..||.|                        .|::.|.:....|..||:.:|..
Mouse    82 ------------GVPEAR------------------------AAVRAAYDAFNSWKGVSVKERSL 110

  Fly   136 IWEKAADLMATTYRQDLNAATML----GQSKTAIQAEIDSAAELIDFIRMNAYFLKEVTK-YQPI 195
            :..|..|||... :.||  |.::    |:.....|.||..:|..::      :|.:|..: |..|
Mouse   111 LLRKWYDLMIQN-KDDL--AKIITAESGKPLKEAQGEILYSALFLE------WFSEEARRIYGDI 166

  Fly   196 SENIKVTKNSLRYRGIDGFIAAVSPFNFTA------IGGNLSYTPALMGNGVLWKPSDTAMLSNW 254
            .......|..|..:...|..|.::|:||.:      :|..|:     .|..|:.||::....|..
Mouse   167 IYTSAKDKRGLVLKQPVGVAAIITPWNFPSAMITRKVGAALA-----AGCTVVVKPAEDTPYSAL 226

  Fly   255 IIFKIMREAGVPDGVVNFVPAD---GPVFGDTITASPHLAGINFTGSVPTFNRLWKQVGNNIDNY 316
            .:.::..:||:|.||.|.:|..   ....|:.:...|.::.|:||||..|...|.....|::   
Mouse   227 ALAQLANQAGIPAGVYNVIPCSRNKAKEVGEVLCTDPLVSKISFTGSTATGKILLHHAANSV--- 288

  Fly   317 VNFPRLTGECGGKNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPESLWPQIKEGLV- 380
               .|::.|.||.....:..||:|:..|...:.|.|...||.|...:|..|...    |.:..| 
Mouse   289 ---KRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRG----IHDSFVT 346

  Fly   381 --CEAAK--LKIGDVQDFSSFTSAVIDDKAFKRITGYIEHAKKSPNLEILAGGTYSDSKGYFVNP 441
              .||.|  |::|:..:..:....:|::||.:::...:..| .:....::.||....|.|.|..|
Mouse   347 KFAEAMKKSLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDA-VAKGATVVTGGKRHQSGGNFFEP 410

  Fly   442 TIVLSKDPKDRI-MTEEIFGPVLSIYVYKESDLLETMKLVHTSTKFALTGAVFGQDEDFVKCALQ 505
            |: ||...:|.: :|||.|||:..:..:   |..|....:..:.:..|.|..:.||...:....:
Mouse   411 TL-LSNVTRDMLCITEETFGPLAPVIKF---DKEEEAVAIANAAEVGLAGYFYSQDPAQIWRVAE 471

  Fly   506 EFKMAAGNFYINDKSTGSVVGQQPFGGGRMSG---TNDKAGGPHYI 548
            :.::  |...:|:....||  :.||||.:.||   ...|.|...|:
Mouse   472 QLEV--GMVGVNEGLISSV--ECPFGGVKQSGLGREGSKYGIDEYL 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 123/531 (23%)
Aldh5a1NP_766120.1 SSADH 66..516 CDD:188167 123/531 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.