DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and Aldh4a1

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_780647.3 Gene:Aldh4a1 / 212647 MGIID:2443883 Length:562 Species:Mus musculus


Alignment Length:563 Identity:327/563 - (58%)
Similarity:419/563 - (74%) Gaps:11/563 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SLQQSLLKSSTRCLGSVIPDLKLK---DFPIANEPILGYLKDSKERKALEQALKGTASSCEDIPI 75
            ||::|||..:.|..|     |:.|   ...:.|||||.:.:.|.||.||::|||......|.||.
Mouse     6 SLRRSLLSHAWRGAG-----LRWKHTSSLKVTNEPILAFSQGSPERDALQKALKDLKGQMEAIPC 65

  Fly    76 VIGGKEYKTPEVRYQVMPHDHQHKLASFYYADKKLIEKAIKTAVETQPKWDRVSIADRLKIWEKA 140
            |:|.:|..|.:::||:.|.:|.||:|.|.||||.|:.:||..|:..:.:||...:|||.:::.||
Mouse    66 VVGDEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKA 130

  Fly   141 ADLMATTYRQDLNAATMLGQSKTAIQAEIDSAAELIDFIRMNAYFLKEVTKYQPISENIKVTKNS 205
            ||:::...|.::.|.||:||.||.||||||:|||||||.|.||.|..|:...||||  :..:.|.
Mouse   131 ADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPIS--VPPSTNH 193

  Fly   206 LRYRGIDGFIAAVSPFNFTAIGGNLSYTPALMGNGVLWKPSDTAMLSNWIIFKIMREAGVPDGVV 270
            ..|||::||:||:||||||||||||:..||||||.|||||||||||:::.:::|:||||:|..::
Mouse   194 TVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNII 258

  Fly   271 NFVPADGPVFGDTITASPHLAGINFTGSVPTFNRLWKQVGNNIDNYVNFPRLTGECGGKNFHFIH 335
            .|||||||.||||:|:|.||.|||||||||||..||:||..|:|.:..||||.||||||||||:|
Mouse   259 QFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVH 323

  Fly   336 ASADVESVVTSTIRSAFEYCGQKCSACSRMYVPESLWPQIKEGLVCEAAKLKIGD-VQDFSSFTS 399
            :||||:|||:.|:||||||.|||||||||:|||:|||||||..|:.|.:::|:|| .:||.:|.|
Mouse   324 SSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFS 388

  Fly   400 AVIDDKAFKRITGYIEHAKKSPNLEILAGGTYSDSKGYFVNPTIVLSKDPKDRIMTEEIFGPVLS 464
            ||||.|||.||..::|||:.||:|.|||||..::|.||:|.|.|:.||||::.||.||||||||:
Mouse   389 AVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLT 453

  Fly   465 IYVYKESDLLETMKLVHTSTKFALTGAVFGQDEDFVKCALQEFKMAAGNFYINDKSTGSVVGQQP 529
            :|||.:....||::||.::|.:.||||||.||:..|:.|.:..:.||||||||||||||||||||
Mouse   454 VYVYPDDKYRETLQLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQP 518

  Fly   530 FGGGRMSGTNDKAGGPHYILRWTSPQSIKETFVPLRDVNYPYM 572
            |||.|.||||||.|||||||||||||.||||..||.|..|.||
Mouse   519 FGGARASGTNDKPGGPHYILRWTSPQVIKETHKPLGDWRYSYM 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 312/522 (60%)
Aldh4a1NP_780647.3 ALDH_F4-17_P5CDH 31..552 CDD:143441 312/522 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849644
Domainoid 1 1.000 590 1.000 Domainoid score I202
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6081
Inparanoid 1 1.050 656 1.000 Inparanoid score I771
Isobase 1 0.950 - 0 Normalized mean entropy S619
OMA 1 1.010 - - QHG63568
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004722
OrthoInspector 1 1.000 - - oto95137
orthoMCL 1 0.900 - - OOG6_102275
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1040
SonicParanoid 1 1.000 - - X3320
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.640

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