DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and alh-2

DIOPT Version :10

Sequence 1:NP_649368.2 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_503467.2 Gene:alh-2 / 187001 WormBaseID:WBGene00000108 Length:514 Species:Caenorhabditis elegans


Alignment Length:574 Identity:146/574 - (25%)
Similarity:228/574 - (39%) Gaps:127/574 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LQQSLLKSSTR-----CLGSVIPDLKLKDFP-------IANEPILGYLKDSKERKALE------- 60
            :..|||:|:.|     |.||.:|. .|.||.       |.||.:     |:|..|..|       
 Worm     1 MDSSLLRSAVRASVQACNGSGLPP-GLADFKPKYTSLFINNEFV-----DAKSGKTFEFVNPANG 59

  Fly    61 -QALKGTASSCEDIPIVIGGKEYKTPEVRYQVMPHDHQHKLASFYYADKKLIEKAIKTAVETQPK 124
             ...|....:.:|:.|.:                                   :|.|.|.:...:
 Worm    60 KLLAKVAEGNRDDVDIAV-----------------------------------EAAKKAFKIGSE 89

  Fly   125 WDRVSIADRLKIWEKAADLMATTYRQDLNAATMLGQSKTAIQA-EIDSAAELIDFIRMNAYFLKE 188
            |.|:..:.|..:..:.||||... |..|.:...|...|...:| .||....:..|.....|..|.
 Worm    90 WRRMDASHRGVLLNRLADLMERD-RVILASLESLDNGKPYKEAYNIDLPISIKTFRYYAGYADKN 153

  Fly   189 -------------VTKYQPISENIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPAL-MGN 239
                         .|:::|:                 |....:.|:||..:.......||| |||
 Worm   154 HGKTIPVGGDYFTYTRHEPV-----------------GVCGQIIPWNFPLLMQAWKLAPALAMGN 201

  Fly   240 GVLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFNR 304
            .|:.|.:....||...:..:::||..|:||||.:|..|...|:.|.:...:..:.||||......
 Worm   202 TVVMKVAVKTPLSALHVASLIKEAQFPEGVVNIIPGRGTDAGEAIASHMDVDKVAFTGSTEVGKT 266

  Fly   305 LWKQVGNNIDNYVNFPRLTGECGGKNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPE 369
            :.|....:     |..::|.|.|||:.:.:.|.||:|..|..:..:.|...||.|||.||.:|..
 Worm   267 IMKAAAES-----NVKKVTLELGGKSPNIVFADADLEEAVRQSHHALFFNQGQCCSAGSRTFVEG 326

  Fly   370 SLWPQIKEGLVCEAAKL----KIGDVQDFSSFTSAVIDDKAFKRITGYIEHAKKSPNLEILAGGT 430
            .::.:    .|.:|.:|    .|||..|.::.....||:...:.|..|||..||. ..:::.||.
 Worm   327 KIYDE----FVAKAKELVEKTVIGDPFDENTTQGPQIDESQVETIMKYIESGKKE-GAQLVTGGV 386

  Fly   431 YSDSKGYFVNPTIVLSKDPKDRIMTEEIFGPVLSIYVYKESDLLETMKLVHTSTKFALTGAVFGQ 495
            ....:||||.|||..:.:.:.:|..|||||||:.:..:   |.:|.:.....:|.:.|...|...
 Worm   387 KHGDQGYFVKPTIFANVNDQMKIAQEEIFGPVMIVIRF---DSMEELIEKANNTIYGLAAGVVTN 448

  Fly   496 DEDFVKCALQEFK-MAAGNFYIN-----DKSTGSVVGQQPFGGGRMSGTNDKAG 543
            |   :..|||... :.||:.::|     |.:.       ||||.:.||...:.|
 Worm   449 D---LNKALQVANTIRAGSVWVNCYDVFDPAA-------PFGGFKQSGIGRELG 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_649368.2 ALDH_F4-17_P5CDH 41..563 CDD:143441 134/536 (25%)
alh-2NP_503467.2 ALDH_F1-2_Ald2-like 34..507 CDD:143410 134/540 (25%)

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