DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and alh-10

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_509203.1 Gene:alh-10 / 180979 WormBaseID:WBGene00000116 Length:506 Species:Caenorhabditis elegans


Alignment Length:455 Identity:124/455 - (27%)
Similarity:205/455 - (45%) Gaps:57/455 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 IEKAIKTAVETQPKWDRVSIADRLKIWEKAADLMATTYRQDLNAATMLGQSKTAIQAEIDSAAEL 175
            :::|::.|.|....|.:.::..|..:..|.|:|: ..:..|:.......|.|....|::......
 Worm    65 VDQAVEAAKEAFKTWKKTTVQQRSALLNKVANLI-EEFNDDIAILESRDQGKPIGLAKVMDIPRC 128

  Fly   176 I----DFIRMNAYFLKEVT-KYQPISENIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPA 235
            :    ||.....|.|...| ..||..:.:...||.  ..|:.|.|   ||:|......:....||
 Worm   129 VQNFRDFANAALYSLSTSTILEQPTGKFVNYVKND--PVGVAGLI---SPWNLPLYLLSFKLAPA 188

  Fly   236 LM-GNGVLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSV 299
            |: ||.|:.|||:...::.|::....:..|.|.||||.|..:|...|..:.....:..|:||||.
 Worm   189 LVAGNTVVCKPSEMTSVTAWVLMHAFKLVGFPPGVVNMVIGEGKSAGQRLVDHVDVPLISFTGST 253

  Fly   300 PTFNRLWKQVGNNIDNYVNFPRLTGECGGKNFHFIHAS---ADVESVVTSTIRSAFEYCGQKCSA 361
            ....:: ::.|..::..|:.     |.||||...::::   :|:.|:.    ||:|...|:.|..
 Worm   254 VIGKKI-QEDGAKLNKKVSL-----EMGGKNPGIVYSNYRKSDIASIA----RSSFLNQGEICLC 308

  Fly   362 CSRMYVPESLWPQIKEGLVCEAAKLKIGD----VQDFSSFTSAVIDDKAFKRITGYIEHAKKSPN 422
            .||::|.:.::....:..|.||.|..:||    || ..:..|.|    .::::..|||.|||. .
 Worm   309 TSRLFVQKPIFADFVKSYVEEAKKFTVGDPTTQVQ-IGAMNSKV----HYEKVKSYIELAKKE-G 367

  Fly   423 LEILAGGTYS----DSKGYFVNPTIVLSKDPKDRIMTEEIFGPVLSIYVYKESDLLETMKLVHTS 483
            .:||.||..:    ...|||:.||:::......::||:||||||:.|..:   |..|.:.....|
 Worm   368 ADILCGGVTTIQNGCENGYFITPTVIVGLHDASKVMTDEIFGPVVCITPF---DTAEEVIERANS 429

  Fly   484 TKFALTGAVFGQDEDFVKCALQEFKMAAGNFYIN-----DKSTGSVVGQQPFGGGRMSGTNDKAG 543
            |.:.|:..|:..|.|.:.....|.:  ||..:.|     |.|       .||||.:.|| |.:.|
 Worm   430 TPYGLSATVWSSDSDELLNTANELR--AGTVWCNTWLARDLS-------MPFGGCKQSG-NGREG 484

  Fly   544  543
             Worm   485  484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 124/455 (27%)
alh-10NP_509203.1 ALDH_F8_HMSADH 45..500 CDD:143412 124/455 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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