DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and alh-10

DIOPT Version :10

Sequence 1:NP_649368.2 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_509203.1 Gene:alh-10 / 180979 WormBaseID:WBGene00000116 Length:506 Species:Caenorhabditis elegans


Alignment Length:111 Identity:24/111 - (21%)
Similarity:34/111 - (30%) Gaps:44/111 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 GGDDDGIDAAFGRNLVNVFLLLHAFGASGNQIRRSDSDSNDSTTI-------NRGTSELNFSEEE 286
            |.||..:..||..           ||           |..|:..|       :||...:||::| 
 Worm    45 GTDDASLRDAFAH-----------FG-----------DVVDAKVIVDRETGRSRGFGFVNFNDE- 86

  Fly   287 EEEEEEERHSNSNSLASRMRRQGRVLLGRSGRRRRDREANQNTGPP 332
                       ..:.|:.....|:.|   :||..|...||.....|
 Worm    87 -----------GAATAAISEMDGKEL---NGRHIRVNPANDRPSAP 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_649368.2 ALDH_F4-17_P5CDH 41..563 CDD:143441 24/111 (22%)
alh-10NP_509203.1 ALDH_F8_HMSADH 45..500 CDD:143412 24/111 (22%)

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