DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and alh-3

DIOPT Version :10

Sequence 1:NP_649368.2 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_502054.2 Gene:alh-3 / 177999 WormBaseID:WBGene00000109 Length:908 Species:Caenorhabditis elegans


Alignment Length:529 Identity:136/529 - (25%)
Similarity:231/529 - (43%) Gaps:73/529 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 IANEPILGYLKDSKERKALEQALKGTASSCEDIPIVIGGKEYKT--PEVRYQV--MPHDHQHKLA 101
            :..:||:..:.:.:.:...:|.:.|......|      |:.:||  |.....:  :|      ||
 Worm   410 VTYDPIVLNVNNMELKFPHDQFIDGKFVGSSD------GRTFKTINPATEKPICELP------LA 462

  Fly   102 SFYYADKKLIEKAIKTAVETQPKWDRVSIADRLKIWEKAADLM-------ATTYRQDLNAATMLG 159
            :....|:.:  :|.|.|.| :.:|.::|..:|.|...|.|:||       ||....|..|...|.
 Worm   463 TVADVDRAV--RAAKKAFE-RGEWRQMSARERGKRLYKLAELMEEHKEELATLESLDAGAVYTLA 524

  Fly   160 QSKTAIQAEIDSAAELIDFIRMNAYFLKEVTKYQ----PISENIKVTKN-SLRYRGIDGFIAAVS 219
             .||.:...||          :..||.....|.|    ||| |.:..|| .|..|...|.:..::
 Worm   525 -LKTHVGMSID----------VWRYFAGWCDKIQGKTIPIS-NARPNKNLCLTLREPIGVVGLIT 577

  Fly   220 PFNFTAIGGNLSYTPA---LMGNGVLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFG 281
            |:|:..:  .||:..|   ..||.|:.||:....|:.....::...||:|.||:|.|...|.:.|
 Worm   578 PWNYPLM--MLSWKMAACLAAGNTVVHKPAQVTPLTALKFAELSVLAGIPPGVINIVTGSGSLVG 640

  Fly   282 DTITASPHLAGINFTGSVPTFNRLWKQVGNNIDNYV---NFPRLTGECGGKNFHFIHASADVESV 343
            :.:||.|.:..|.||||.        ::|..:....   |..:::.|.|||:...|.|.||:|..
 Worm   641 NRLTAHPDVRKIGFTGST--------EIGATVMESCAKSNIKKVSLELGGKSPLIIFADADLEKA 697

  Fly   344 VTSTIRSAFEYCGQKCSACSRMYVPESLWPQIKEGLVCEAAKLKIGDVQDFSSFTSAVIDDKAFK 408
            |.....:.|...|:.|.|..|:::.:|:.....:.||.||.:.:|||..|.|:............
 Worm   698 VKQACGAVFFNKGENCIAAGRVFIAKSIHDDFVKKLVEEAKQYQIGDPLDRSTAHGPQNHLAHLN 762

  Fly   409 RITGYIEHAKKSPNLEILAGGTYSDSKGYFVNPTIVLSKDPKDRIMTEEIFGPVLSIYVYKESDL 473
            ::..|:|.| .:...::..||...:.:|.:..|||:.:.|.::...:||.|||::.:..:.:.|:
 Worm   763 KLVEYVEKA-VAGGAKVEVGGKRLEREGLYFPPTILSNIDDENFAASEESFGPIMCVSSFDDDDI 826

  Fly   474 LETMKLVHTSTKFALTGAVFGQDEDFVKCALQEFKMA----AGNFYINDKSTGSVVGQQPFGGGR 534
            .:.::..: .|:|.|...||.:|..      :..::|    ||..::|......|..  ||||.:
 Worm   827 EDVLRRAN-DTEFGLAAGVFTRDSS------KSLRVAEALHAGTVFVNTYQKTDVAA--PFGGFK 882

  Fly   535 MSGTNDKAG 543
            .||.....|
 Worm   883 QSGFGKDMG 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_649368.2 ALDH_F4-17_P5CDH 41..563 CDD:143441 136/529 (26%)
alh-3NP_502054.2 FMT_core_FDH_N 1..209 CDD:187716
FDH_Hydrolase_C 214..315 CDD:187731
PP-binding 335..393 CDD:425746
ALDH-SF 423..908 CDD:448367 134/516 (26%)
Blue background indicates that the domain is not in the aligned region.

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