DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment P5CDh1 and alh-6

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:NP_493946.1 Gene:alh-6 / 173510 WormBaseID:WBGene00000112 Length:563 Species:Caenorhabditis elegans


Alignment Length:571 Identity:303/571 - (53%)
Similarity:404/571 - (70%) Gaps:12/571 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 MRSSSSRCSSLQQSLLKSSTRCLGSVIPDLKLKDF--PIANEPILGYLKDSKERKALEQALKGTA 67
            |.|.::|.|.:.|       :|..|....|...||  ...|||||.|.|.||||:.||.||...:
 Worm     1 MLSFAARRSLITQ-------KCAASTYSGLTSADFLKKKTNEPILEYRKGSKERQDLEAALAFYS 58

  Fly    68 SSCEDIPIVIGGKEYKTPEVRYQVMPHDHQHKLASFYYADKKLIEKAIKTAVETQPKWDRVSIAD 132
            .:..::|:.||.|:......:.||:|.||:..||.:.||..:.|::||..|::.:..|:|..:.:
 Worm    59 KNITEVPLRIGDKKITNKLEQKQVIPSDHRSTLAKYTYATGEQIQEAIDVALQARGAWERKPLKE 123

  Fly   133 RLKIWEKAADLMATTYRQDLNAATMLGQSKTAIQAEIDSAAELIDFIRMNAYFLKEVTKYQPISE 197
            |.:|..:||||.|..||..|||:|||||.|..||||||:|.|||||.|.||.|..|:..|:||| 
 Worm   124 RAEILLRAADLAAGKYRMKLNASTMLGQGKNIIQAEIDAACELIDFFRFNAVFAMELEHYEPIS- 187

  Fly   198 NIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPALMGNGVLWKPSDTAMLSNWIIFKIMRE 262
             .|:|||::::||::||:||::|||||||||||...||||||..|||||:||:|||:||::::.|
 Worm   188 -TKITKNTMQFRGMEGFVAAIAPFNFTAIGGNLPTAPALMGNVSLWKPSNTAVLSNYIIYELLEE 251

  Fly   263 AGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFNRLWKQVGNNIDNYVNFPRLTGECG 327
            ||:|.|:::|:|:|||||||.|||||||:.:|||||||||..:|::|..|:||||.||:|.||||
 Worm   252 AGMPPGILSFLPSDGPVFGDVITASPHLSAVNFTGSVPTFKTIWRKVAENLDNYVTFPKLIGECG 316

  Fly   328 GKNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPESLWPQIKEGLVCEAAKLKIGDVQ 392
            ||||||:|.||.|::|...|.|||:||.|||||||||||.|:|:||:|.|.:.....::|:|||:
 Worm   317 GKNFHFVHPSAHVDAVAAGTARSAWEYSGQKCSACSRMYAPKSIWPKILEKISAIHKEIKLGDVR 381

  Fly   393 DFSSFTSAVIDDKAFKRITGYIEHAKK-SPNLEILAGGTYSDSKGYFVNPTIVLSKDPKDRIMTE 456
            |.|.|.|||||||||.|:..||:.||. :....::.||...|..|||:.||::...|||.:::||
 Worm   382 DGSVFLSAVIDDKAFARLKAYIDFAKTGADGANVVLGGKCDDKTGYFIEPTLITVTDPKSKLLTE 446

  Fly   457 EIFGPVLSIYVYKESDLLETMKLVHTSTKFALTGAVFGQDEDFVKCALQEFKMAAGNFYINDKST 521
            |:||||:::.||::|.:.|.:..|..:|.:.||||||.||::|:..|....:.|.||.|:|||||
 Worm   447 EMFGPVVTVLVYEDSKVDEVLATVKDATPYGLTGAVFSQDKEFLYRARDVLRDAVGNMYLNDKST 511

  Fly   522 GSVVGQQPFGGGRMSGTNDKAGGPHYILRWTSPQSIKETFVPLRDVNYPYM 572
            ||:||||||||.|:||||||||||||.||||||.:||||.|.|.|..||.|
 Worm   512 GSIVGQQPFGGSRLSGTNDKAGGPHYGLRWTSPLTIKETSVSLTDWKYPSM 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 287/522 (55%)
alh-6NP_493946.1 ALDH_F4-17_P5CDH 34..552 CDD:143441 287/519 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166854
Domainoid 1 1.000 557 1.000 Domainoid score I119
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6081
Inparanoid 1 1.050 609 1.000 Inparanoid score I498
Isobase 1 0.950 - 0 Normalized mean entropy S619
OMA 1 1.010 - - QHG63568
OrthoDB 1 1.010 - - D293592at33208
OrthoFinder 1 1.000 - - FOG0004722
OrthoInspector 1 1.000 - - oto17933
orthoMCL 1 0.900 - - OOG6_102275
Panther 1 1.100 - - LDO PTHR42862
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1040
SonicParanoid 1 1.000 - - X3320
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.890

Return to query results.
Submit another query.