DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment P5CDh1 and LOC1274242

DIOPT Version :10

Sequence 1:NP_649368.2 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_313331.4 Gene:LOC1274242 / 1274242 VectorBaseID:AGAMI1_006155 Length:489 Species:Anopheles gambiae


Alignment Length:483 Identity:139/483 - (28%)
Similarity:225/483 - (46%) Gaps:57/483 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 GKEYKTPEVRYQVMPHDHQHKLASFYYADKKLIE---KAIKTAVETQPKWDRVSIADRLKIWEKA 140
            ||.:.|      :.|...| .:.|....||..:|   :|.|.|......|.::..:.|.::..:.
Mosquito    25 GKTFAT------LNPATEQ-PIVSVAEGDKDDVEVAVRAAKAAFARSAPWRQMDASGRGRLLNRL 82

  Fly   141 ADLMATTYRQDLNAAT---MLGQSKTAIQAEIDSAAELIDFIRMNAYFLKEVTKYQPISENIKVT 202
            ||||    ::|::...   .|...||...::.|... .||..|..|.:..::......|:...:|
Mosquito    83 ADLM----QRDIDTLANLESLDNGKTFGDSQFDITC-AIDTFRYYAGWADKIHGSTVPSDGPVLT 142

  Fly   203 KNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPAL-MGNGVLWKPSDTAMLSNWIIFKIMREAGVP 266
              .:|...: |.:..:.|:|:..:.....:.||| .|..::.||::...||...:..:.:|||.|
Mosquito   143 --YIRKEPV-GVVGQIIPWNYPILMLTWKWAPALAAGCTLVLKPAEQTPLSALHMAALSKEAGFP 204

  Fly   267 DGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFNRLWKQVGNNIDNYVNFPRLTGECGGKNF 331
            |||:|.|...||..|..|.|.|.:..:.|||||.|...:......:     |..:::.|.|||:.
Mosquito   205 DGVINVVNGFGPTVGAAIVAHPDIRKVAFTGSVETGRIILSGASTS-----NLKKVSLELGGKSP 264

  Fly   332 HFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPESLWPQIKEGLVCEAAKL----KIGDVQ 392
            ..|...||::..|.....:.|...||.|.|.||.:|.|.::    :..|.:||::    |:|   
Mosquito   265 LVIFNDADLDEAVEIAHNAIFANHGQNCCAGSRTFVQEGIY----DAFVAKAAEMARQRKVG--- 322

  Fly   393 DFSSFTSAV-----IDDKAFKRITGYIEHAKKSPNLEILAGGTYSDSKGYFVNPTIVLSKDPKDR 452
              ::|...|     :|::.||:|.||||.| ::...::.|||..:.:.||||.||:..:.....:
Mosquito   323 --NAFQDGVQQGPQVDEEQFKKILGYIESA-QAEGAQLQAGGKRAGTVGYFVEPTVFSNVTDGMK 384

  Fly   453 IMTEEIFGPVLSIYVYKESDLLETMKLVHTSTKFALTGAVFGQDEDFVKCALQEFKMA--AGNFY 515
            |..|||||||.||  .|.|.|.|.::..: ||::.|...|..:|   :..|: .|..|  ||:.:
Mosquito   385 IAREEIFGPVQSI--LKFSTLDEVIERAN-STEYGLAAGVVTKD---INTAI-TFTNAVEAGSVW 442

  Fly   516 INDKSTGSVVGQQPFGGGRMSGTNDKAG 543
            :|  ....||...||||.:.||:..:.|
Mosquito   443 VN--CYDYVVPTTPFGGYKQSGSGRELG 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_649368.2 ALDH_F4-17_P5CDH 41..563 CDD:143441 139/483 (29%)
LOC1274242XP_313331.4 ALDH-SF 3..484 CDD:448367 139/483 (29%)

Return to query results.
Submit another query.