DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment P5CDh1 and Ssadh

DIOPT Version :10

Sequence 1:NP_649368.2 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_312856.5 Gene:Ssadh / 1273834 VectorBaseID:AGAMI1_011131 Length:523 Species:Anopheles gambiae


Alignment Length:486 Identity:118/486 - (24%)
Similarity:208/486 - (42%) Gaps:73/486 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 IEKAIKTAVET--QPKWDRVSIADR---LKIWEKAADLMATTYRQDLNAATMLGQSKTAIQAEID 170
            ::.||..|.:.  :|:|...:..:|   ||.|..   ||... ||:: |:.|..:|...:...:.
Mosquito    83 VQLAIDAAYDAFYEPRWHNSTAKERAALLKNWHA---LMEKN-RQEI-ASIMTAESGKPLVESLG 142

  Fly   171 SAAELIDFIRMNAYFLKEVTKY------QPI-SENIKVTKNSLRYRGIDGFIAAVSPFNFT-AIG 227
            ..|....|:.   :|.:|..:.      .|: :..|.:|:|.:   |:.|.|   :|:||. |:.
Mosquito   143 EVAYGNSFVE---WFAEEARRIYGEIVPSPVANRQIMMTRNPV---GVAGLI---TPWNFPHAMI 198

  Fly   228 GNLSYTPALMGNGVLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVPAD---GPVFGDTITASPH 289
            ...:......|..|:.||::...|:...:.::..|||.|.||:|.:.:.   ....|..:..|..
Mosquito   199 TRKAAAAIAAGCTVVIKPAEDTPLTALALARLAEEAGFPKGVINVITSSRTHAAEIGQLLCGSDK 263

  Fly   290 LAGINFTGSVPTFNRLWKQVGNNIDNYVNFPRLTGECGGKNFHFIHASADVESVVTSTIRSAFEY 354
            :|.|:||||......|::|..:.:      .|:..|.||.....:..|||:|..:|..:.|.|..
Mosquito   264 VAAISFTGSTEVGKLLYRQCADGV------KRIGLELGGNAPFIVFKSADMEKALTGAMNSKFRN 322

  Fly   355 CGQKCSACSRMYVPESLWPQIKEGLVCEAAKLKIGDVQDFSSFTSAVIDDKAFKRITGYIEHAKK 419
            |||.|.:.:|..:.:.:..:....|:....||.|||..........:|:....|::..:::.||.
Mosquito   323 CGQTCISANRFLIQDEVHDEFVAKLIERIRKLAIGDGSRDGVQIGPLINQAQLKKVDQFVQDAKD 387

  Fly   420 SPNLEILAGGTYSDSKGYFVNPTIVLSKDPKDRIM--TEEIFGPVLSIYVYK-ESDLLETMKLVH 481
            ........|.|..:....:..||:|  .|.:|.::  .||:||||:|:..:| |::.|    .:.
Mosquito   388 KGAKVHTGGKTLPELGPLYYEPTVV--TDLRDNMLLYNEEVFGPVVSVVRFKTEAEAL----AIA 446

  Fly   482 TSTKFALTGAVFGQDEDFVKCALQEFKMA----AGNFYINDKSTGSVVGQQPFGGGRMSGTNDKA 542
            ..|:..|.|..|..|.:      |.|::|    .|...||:....:.  :..|||.:.||.. :.
Mosquito   447 NGTRRGLAGYFFSNDLN------QVFRVARQLETGMIGINEGLISAT--EAAFGGIKESGIG-RE 502

  Fly   543 GGPHYILRWTSPQSIKETFVPLRDVNYPYMC 573
            |..|.|          :.:|.::     |:|
Mosquito   503 GSRHGI----------DEYVYIK-----YLC 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_649368.2 ALDH_F4-17_P5CDH 41..563 CDD:143441 115/474 (24%)
SsadhXP_312856.5 None

Return to query results.
Submit another query.