DRSC/TRiP Functional Genomics Resources

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Protein Alignment P5CDh1 and aldh1l2

DIOPT Version :9

Sequence 1:NP_001189159.1 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster
Sequence 2:XP_002938116.1 Gene:aldh1l2 / 100127737 XenbaseID:XB-GENE-5820495 Length:922 Species:Xenopus tropicalis


Alignment Length:593 Identity:140/593 - (23%)
Similarity:250/593 - (42%) Gaps:99/593 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRMMRSSSSRCSSLQ---QSLLKSST--RCLGSVIPDLKLKDFPIANEPILGY----LKDSKER 56
            ::|::.....:|..|:   :.:..::|  ..:..|:..|:.:|   ..|.::.|    :.:...:
 Frog   378 VVRLVEELKQKCEGLELQNEDVYMATTFEEFIQMVVRKLRGED---KEELVIDYASLNVNNMTVK 439

  Fly    57 KALEQALKGTASSCEDIPIVIGGKEYKTPEVRYQVMPHDHQ--HKLASFYYADKKLIEKAIKTAV 119
            ...:..:.|..:..::      ||.|.|      :.|.|..  .|:|....||   ::||:..|.
 Frog   440 MPYQCFINGQFADADN------GKTYDT------INPTDGSVICKVAYCSVAD---VDKAVAAAK 489

  Fly   120 ET--QPKWDRVSIADRLKIWEKAADLMATTYRQDLNAATMLGQSKTAIQAEIDSAA----ELIDF 178
            :.  ..:|.:::..||.:|..:.|||| ..::::|          ..|:| |||.|    .|...
 Frog   490 DAFENGEWGKMNARDRGRILYRLADLM-EEHQEEL----------ATIEA-IDSGAVYTLALKTH 542

  Fly   179 IRMNA----YFLKEVTKYQ----PISE-----NIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNL 230
            :.|:.    ||.....|.|    ||::     |:..||....     |..|.|.|:|:       
 Frog   543 VGMSVQTFRYFAGWCDKIQGSTIPINQARPNRNLTFTKKEPL-----GVCAIVIPWNY------- 595

  Fly   231 SYTPALM-----------GNGVLWKPSDTAMLSNWIIFKIMREAGVPDGVVNFVPADGPVFGDTI 284
               |.:|           ||.::.||:....|:.....::..:||||.||:|.:|..|.:.|..:
 Frog   596 ---PLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELAVKAGVPKGVINILPGSGGLVGQRL 657

  Fly   285 TASPHLAGINFTGSVPTFNRLWKQVGNNIDNYVNFPRLTGECGGKNFHFIHASADVESVVTSTIR 349
            :..|.:..:.||||.|...::.|....:     |..:::.|.|||:...|....|::..|...:.
 Frog   658 SEHPDIRKLGFTGSTPIGKQIMKSCAVS-----NLKKVSLELGGKSPLIIFNDCDLDKAVRMGMG 717

  Fly   350 SAFEYCGQKCSACSRMYVPESLWPQIKEGLVCEAAKLKIGDVQDFSSFTSAVIDDKAFKRITGYI 414
            :.:...|:.|.|..|::|.||:..:....:|.|..|::|||..|.|:...........:::..|.
 Frog   718 AVYFNKGENCIAAGRLFVEESIHDEFVTRVVEEIKKMRIGDPLDRSTDHGPQNHRAHLEKLLEYC 782

  Fly   415 EHAKKSPNLEILAGGTYSDSKGYFVNPTIVLSKDPKDRIMTEEIFGPVLSIYVYKESDLLETMKL 479
            |...|. ...::.||......|:|:.||:....:....:..||.|||::.|..:|:.|:...::.
 Frog   783 EIGVKE-GATLVYGGRKVPRPGFFMEPTVFTDVEDHMYLAEEESFGPIMVISKFKDGDIDGVLRR 846

  Fly   480 VHTSTKFALTGAVFGQDEDFVKCALQEFKMAAGNFYINDKSTGSVVGQQPFGGGRMSGTNDKAG- 543
            .: :|::.|...||  .:|..|......|:.||..:||..:...|..  ||||.:.||.....| 
 Frog   847 AN-NTEYGLASGVF--TKDISKAMYVSEKLDAGTVFINTYNKTDVAA--PFGGFKQSGFGKDLGE 906

  Fly   544 -GPHYILR 550
             ..|..||
 Frog   907 EALHEYLR 914

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P5CDh1NP_001189159.1 ALDH_F4-17_P5CDH 41..563 CDD:143441 133/548 (24%)
aldh1l2XP_002938116.1 FMT_core_FDH_N 23..225 CDD:187716
FDH_Hydrolase_C 228..327 CDD:187731
PP-binding 346..412 CDD:376348 4/33 (12%)
ALDH_F1L_FTFDH 437..922 CDD:143458 131/531 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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