DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nopp140 and NOLC1

DIOPT Version :9

Sequence 1:NP_001262195.1 Gene:Nopp140 / 40433 FlyBaseID:FBgn0037137 Length:773 Species:Drosophila melanogaster
Sequence 2:XP_005270330.1 Gene:NOLC1 / 9221 HGNCID:15608 Length:710 Species:Homo sapiens


Alignment Length:807 Identity:261/807 - (32%)
Similarity:333/807 - (41%) Gaps:245/807 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IVLEYLQSKDKNLAKVFQQKTKAASVAKSSPKLSEILQFYQ--------------------TKSP 55
            :||.:|  :|..|::|..:..||....:.....|.:|..|.                    .|..
Human    17 LVLGFL--RDNQLSEVANKFAKATGATQQDANASSLLDIYSFWLNRSAKVPERKLQANGPVAKKA 79

  Fly    56 KKIPAIKATAGDSSEDSDSDSESDAAPKKPATAPA----LTNGKAVKKAASS-----TSEDSDSE 111
            ||    ||::.||.:.|:.:.|....|.|.|..||    |..|||..||:.|     :|:|.|.|
Human    80 KK----KASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASESSSSEESSDDDDEE 140

  Fly   112 EEK--------KPAAKATPAKAVGKKAKS--SSEDSSSEEEAPK----KAAPV------KAP--P 154
            ::|        ||.|||  |||..|||||  |..|||||:|.||    |..||      |||  |
Human   141 DQKKQPVQKGVKPQAKA--AKAPPKKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTKAPPKP 203

  Fly   155 AKAAP------AKKVESSSEDSSSEEEPAKPAVKATTTKVAPAKKADSSSEESSSDEETKPAAKP 213
            |:|||      |....|||..|||.::..:....||..||...         :|...||.|..:.
Human   204 ARAAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKKVWTI---------TSVRAETVPKKQV 259

  Fly   214 VAKAAPAKKA------ASSSEESDSDDEPAAKKP---------AVQPAAKPAPKAAASSSEDSSS 263
            ||| ||.|.|      :||||:|.||:|...|||         :|.|.:.|.||.:..:      
Human   260 VAK-APVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGT------ 317

  Fly   264 EEEVKPAAKSAAKLAPAKKGASSSD--DSSSEDE-APKKAATLAKPISKAAPTKKA-----DSST 320
                :|..|:..|..|.:....|||  |||||:| .|...|.::|..:|..|.|||     |||.
Human   318 ----QPPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSD 378

  Fly   321 EDSSSEDDAPKKVAPAKATPAKAIPAKKAASSDDSSSEEEAPKKAAPANATPARAPP-------- 377
            .|||.:|:||.|  ||..|              .:||.:.|....:|| ..||.||.        
Human   379 SDSSEDDEAPSK--PAGTT--------------KNSSNKPAVTTKSPA-VKPAAAPKQPVGGGQK 426

  Fly   378 --AKKAASS----DDSSSEEEAPKK-------AAPAKAT---PAKATP---AKKAASSDDSSSEE 423
              .:||.||    :.||||||..||       .|.|||.   |||..|   ...::.||.|||||
Human   427 LLTRKADSSSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEE 491

  Fly   424 EAPKKAAAPAKATPAKKAKSSSEDSDSDEEEAPKKPAAKAVAKA-----ASSEDSDSSEDEK--- 480
            |..|.:.:..|..|.|.|..:          ||.|||:....||     :||:||...|:||   
Human   492 EEEKTSKSAVKKKPQKVAGGA----------APSKPASAKKGKAESSNSSSSDDSSEEEEEKLKG 546

  Fly   481 ---PAKAAPKALAKSAKAASSDSDDSSDEETPAVKPAVKKTAAPAKKADSSSDESDSGEESGEVK 542
               |...||||...||..|.:.....:.||....|   ||.|....|             ||.:|
Human   547 KGSPRPQAPKANGTSALTAQNGKAAKNSEEEEEEK---KKAAVVVSK-------------SGSLK 595

  Fly   543 PNSATNGNEKTAQKRKFSGGDQDEATPNKKYNNFVKSGEQQKNDFTSTPNNTFSRNHNMNNSGGG 607
                         |||.:...::..||            |.|.....|| |||.:...     |.
Human   596 -------------KRKQNEAAKEAETP------------QAKKIKLQTP-NTFPKRKK-----GE 629

  Fly   608 SGRRSPFRRVRTEDVVVDSRVQDMSFEAKENDFKKHNNGRGGRGGSGFSGRPDRSTWETNKFNGE 672
            ....|||||||.|::.|||||.|.||:||             ||.:|..|  :|:. :..||.  
Human   630 KRASSPFRRVREEEIEVDSRVADNSFDAK-------------RGAAGDWG--ERAN-QVLKFT-- 676

  Fly   673 GGGDGGGFKKIGDRKSFGGFDNNQRGG 699
               .|..|:....:|..|.:    |||
Human   677 ---KGKSFRHEKTKKKRGSY----RGG 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nopp140NP_001262195.1 None
NOLC1XP_005270330.1 SRP40_C 635..701 CDD:282829 31/87 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004782
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23216
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1974
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.130

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