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Protein Alignment Nopp140 and nolc1
DIOPT Version :9
| Sequence 1: | NP_001262195.1 |
Gene: | Nopp140 / 40433 |
FlyBaseID: | FBgn0037137 |
Length: | 773 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001034819.1 |
Gene: | nolc1 / 395027 |
XenbaseID: | XB-GENE-6454592 |
Length: | 917 |
Species: | Xenopus tropicalis |
| Alignment Length: | |
Identity: | / - (0%) |
| Similarity: | / - (0%) |
Gaps: | / - (0%) |
- Green bases have known domain annotations that are detailed below.
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Nopp140 | NP_001262195.1 |
None |
| nolc1 | NP_001034819.1 |
SRP40_C |
842..910 |
CDD:282829 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0004782 |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR23216 |
| Phylome |
0 | 0.000 |
Not matched by this tool. |
| RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R1974 |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 4.130 |
|
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