Protein Alignment Nopp140 and Rrp1

DIOPT Version :9

• Sequence 1: NP_001262195.1
• Gene: Nopp140 / 40433
• FlyBaseID: FBgn0037137
• Length: 773
• Species: Drosophila melanogaster
• Sequence 2: NP_001137776.1
• Gene: Rrp1 / 33500
• FlyBaseID: FBgn0004584
• Length: 706
• Species: Drosophila melanogaster
• Alignment Length: 513
• Identity: 138/513 - (26%)
• Similarity: 204/513 - (39%)
• Gaps: 119/513 - (23%)

  Fly    58 IPAIKATAGDSSEDSDSDSESDAAPKKPATAPALTNGKAVKKAASSTSEDSDSEEEKKPAAKATP 122
            :|.:||.          ..:::|...:|.......||..|.:.|     ||.:||.|.| ||..|
  Fly     1 MPRVKAV----------KKQAEALASEPTDPTPNANGNGVDENA-----DSAAEELKVP-AKGKP 49

  Fly   123 AKAVGKKAKSSSEDSSSEEEAPKKAAPVKAPPAKAAPAKKVESSSEDSSSEEEPAKP--AVKATT 185
            ......|...|:|:|...|       |.|||.|.|...||....::::...|..|||  ..|..|
  Fly    50 RARKATKTAVSAENSEEVE-------PQKAPTAAARGKKKQPKDTDENGQMEVVAKPKGRAKKAT 107

  Fly   186 TKVAPAKKADSSSEESSSDEETKPAAKPVAKAAPAKKAASSSEESDSDDEPAAKKPAVQPA---A 247
            .:..|..|.|..:.::     |||.||.....||.:..:|         .|..:..|.:|.   |
  Fly   108 AEAEPEPKVDLPAGKA-----TKPRAKKEPTPAPDEVTSS---------PPKGRAKAEKPTNAQA 158

  Fly   248 KPAPKAAASSSEDSSSEEEVKPAAKSAAKLA-PAKKGASSSDDSSSEDEAPKKAATLAKPISKAA 311
            |...:....:..:..:||..:|..:.|.|.| |..|  ..::..:...|..:||.|.||   :|.
  Fly   159 KGRKRKELPAEANGGAEEAAEPPKQRARKEAVPTLK--EQAEPGTISKEKVQKAETAAK---RAR 218

  Fly   312 PTKK-ADS---STEDSSSEDDAPKKVAPAKATPAKAI-PAKKAASSDDSSSEE-EAPKKAAPANA 370
            .||: |||   :..|....|:.|.|.|..:|...|.: |:.:......|..|| |:|.|.|
  Fly   219 GTKRLADSEIAAALDEPEVDEVPPKAASKRAKKGKMVEPSPETVGDFQSVQEEVESPPKTA---- 279

  Fly   371 TPARAPPAKKAASSDDSSSEEEAPKKAAPAKATPAKATPAKKAASSDDSSSEEEAPKKAAAPAKA 435
                |.|.|:|..:.:..:..|...|        .||.|.|:.|..:   .:|.||.|
  Fly   280 ----AAPKKRAKKTTNGETAVELEPK--------TKAKPTKQRAKKE---GKEPAPGK------- 322

  Fly   436 TPAKKAKSSSEDSDSDEEEA-------PKKPAAKAVAKAASSED-SDSSEDEKPAKAAPKALAKS 492
               |:.||:.:::...||||       |.|...||..||...|| .:::|:.|||:...||   :
  Fly   323 ---KQKKSADKENGVVEEEAKPSTETKPAKGRKKAPVKAEDVEDIEEAAEESKPARGRKKA---A 381

  Fly   493 AKAASSDSDDSSDEETPAVK---------------------PAVKKTAAPAKKADSSS 529
            |||...|.|:.|..::...:                     ||.||    ||||::.:
  Fly   382 AKAEEPDVDEESGSKSMLAEQSGCGGAAVLKSLQTMLNFCFPATKK----AKKAETKT 435

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nopp140	NP_001262195.1	None
Rrp1	NP_001137776.1	RecX	15..>217	CDD:294607	63/233 (27%)
		RR_TM4-6	<314..>388	CDD:283990	28/89 (31%)
		Ape1-like_AP-endo	454..704	CDD:197321

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG2992
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900