DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nopp140 and Y39B6A.1

DIOPT Version :10

Sequence 1:NP_001262195.1 Gene:Nopp140 / 40433 FlyBaseID:FBgn0037137 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_741698.1 Gene:Y39B6A.1 / 180264 WormBaseID:WBGene00012664 Length:735 Species:Caenorhabditis elegans


Alignment Length:360 Identity:114/360 - (31%)
Similarity:147/360 - (40%) Gaps:112/360 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 IKATAGDSSEDSDSDSESDAAPKKPATAPALTNGKAVKKAASSTSEDSDSEEEK---KPAAKATP 122
            :||....||..|.|.|.|.::                ..::||:|..|:||:||   |..|| ..
 Worm   102 VKAQDSSSSSSSSSSSSSSSS----------------SSSSSSSSSSSESEDEKHHHKKHAK-KH 149

  Fly   123 AKAVGKKAKSSSEDSSSEEEAPKKAAPVKAPPAKAAPAKKVESSSEDSSSEEEPAKPAVKATTTK 187
            .|...|||:|||..|||...:.                   .|||..||||.|..|...|....|
 Worm   150 LKKHHKKAESSSSSSSSSSSSS-------------------SSSSSSSSSESEDEKHHHKKHAKK 195

  Fly   188 VAPA--KKADSSSEESSSDEETKPAAKPVAKAAPAKKAASSSEESDSDDEP-AAKKPAVQPAAKP 249
            ....  |||:|||..|||            .::.:..::|||..|:|:||. ..||.||:   |.
 Worm   196 HLKKHHKKAESSSSSSSS------------SSSSSSSSSSSSSSSESEDEKHHHKKHAVK---KH 245

  Fly   250 APKAAASSSEDSSSEEEVKPAAKSAAKLAPAKKGASSSDDSSSEDEA--------------PKKA 300
            ..||.:|||..|||                    :|||..||||||.              .|||
 Worm   246 HKKAESSSSSSSSS--------------------SSSSSSSSSEDEKHHHKKHAAKKHVKHHKKA 290

  Fly   301 ATLAKPISKAAPTKKADSSTEDSSSEDDAPKKVAPAKATPAKAIPAKKAASSDDSSSEEEAPKKA 365
            |:.:...|.::.:..:.||:..|.|||:..||....|.:..|. ..||||||..|||        
 Worm   291 ASSSSSSSSSSSSSSSSSSSSSSESEDEKKKKKVHHKKSHGKK-HHKKAASSSSSSS-------- 346

  Fly   366 APANATPARAPPAKKAASSDDSSSEEEAPKKAAPA 400
                        :..::||..||||.|..||.|||
 Worm   347 ------------SSSSSSSSSSSSESEDEKKHAPA 369

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