DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7148 and AT5G23340

DIOPT Version :9

Sequence 1:NP_649366.1 Gene:CG7148 / 40432 FlyBaseID:FBgn0046301 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_197725.1 Gene:AT5G23340 / 832398 AraportID:AT5G23340 Length:405 Species:Arabidopsis thaliana


Alignment Length:475 Identity:102/475 - (21%)
Similarity:153/475 - (32%) Gaps:140/475 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LDDDCLAEIFDRLQDLPSEVSFARTCRRVQYICLSKWRTSHAYEQLDLEKWRVLLPNHEDLVYFL 76
            |.||.|..:..||.....:..|...|:|        |        |:|:.        .|.....
plant    10 LTDDELRWVLSRLDSDKDKEVFGLVCKR--------W--------LNLQS--------TDRKKLA 50

  Fly    77 TQMRPYIREMGGSSCLCSILKDLDEMHIAELPMVTSFYYDPDGVDCYPTNRSIRKLARLLPGLKK 141
            .:..|::...     |.|....:.|:.::: .:..|||  |...|        ..||.:..|.|.
plant    51 ARAGPHMLRR-----LASRFTQIVELDLSQ-SISRSFY--PGVTD--------SDLAVISEGFKF 99

  Fly   142 LRLTTPID------------GRYLSNFQHLQELHLYEDQHKAFELQQKYLDEVCRTLHDLRVLDI 194
            ||:....:            ||.||..|.|       |.....:|..|.|..|....||||.|.:
plant   100 LRVLNLHNCKGITDTGLASIGRCLSLLQFL-------DVSYCRKLSDKGLSAVAEGCHDLRALHL 157

  Fly   195 R-----TYDMISKLQ--------LGNCLQSFKNLTDLKLNLATLKPILPAVLELPSLRKLVVLLD 246
            .     |.:.:..|.        ||  ||...|:||  ..||.|         :...||:..|..
plant   158 AGCRFITDESLKSLSERCRDLEALG--LQGCTNITD--SGLADL---------VKGCRKIKSLDI 209

  Fly   247 NEWH------IPPLVSPDSYDHKIREVSEFYEIMAFKAKDIVGFAVDGYYMPLEPGWDEKLPIWT 305
            |:..      :..:....:...|..::.:.|::.......:..|.                    
plant   210 NKCSNVGDAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFC-------------------- 254

  Fly   306 HRRLKRLAICSWTHSAD---YLKRYTCMTELQLLCVRNWNDLSDEILLEFVELCPRLEHLDVSYC 367
             :.|:.|.|......:|   .|...:|...|:.|.:....::||..|...::.|..||.||:..|
plant   255 -KNLETLIIGGCRDISDESIMLLADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCC 318

  Fly   368 RNLTPTFL-------PRALSILKRREPFK-QKTGVGRSPPLKLYYDLSGFEDFVDRANLKSSLEY 424
            ..:|.|..       ...|.:||.....| ..||:|     ||....|..| ::|..:|....|.
plant   319 EEVTDTAFRDLGSDDVLGLKVLKVSNCTKITVTGIG-----KLLDKCSSLE-YIDVRSLPHVTEV 377

  Fly   425 RGYIVFTADFPVDSERGLSF 444
            |           .||.||.|
plant   378 R-----------CSEAGLEF 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7148NP_649366.1 leucine-rich repeat 333..358 CDD:275381 6/24 (25%)
AT5G23340NP_197725.1 F-box_5 12..48 CDD:408301 12/59 (20%)
leucine-rich repeat 68..99 CDD:275381 9/41 (22%)
AMN1 85..323 CDD:187754 59/286 (21%)
leucine-rich repeat 100..125 CDD:275381 5/24 (21%)
leucine-rich repeat 126..151 CDD:275381 7/31 (23%)
leucine-rich repeat 152..177 CDD:275381 5/24 (21%)
leucine-rich repeat 178..203 CDD:275381 10/37 (27%)
leucine-rich repeat 204..230 CDD:275381 2/25 (8%)
leucine-rich repeat 231..256 CDD:275381 3/45 (7%)
leucine-rich repeat 257..283 CDD:275381 6/25 (24%)
leucine-rich repeat 284..309 CDD:275381 6/24 (25%)
leucine-rich repeat 310..336 CDD:275381 7/25 (28%)
leucine-rich repeat 337..362 CDD:275381 9/29 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1046098at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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