DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7148 and AT5G23340

DIOPT Version :10

Sequence 1:NP_649366.1 Gene:CG7148 / 40432 FlyBaseID:FBgn0046301 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_197725.1 Gene:AT5G23340 / 832398 AraportID:AT5G23340 Length:405 Species:Arabidopsis thaliana


Alignment Length:475 Identity:102/475 - (21%)
Similarity:153/475 - (32%) Gaps:140/475 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LDDDCLAEIFDRLQDLPSEVSFARTCRRVQYICLSKWRTSHAYEQLDLEKWRVLLPNHEDLVYFL 76
            |.||.|..:..||.....:..|...|:|        |        |:|:.        .|.....
plant    10 LTDDELRWVLSRLDSDKDKEVFGLVCKR--------W--------LNLQS--------TDRKKLA 50

  Fly    77 TQMRPYIREMGGSSCLCSILKDLDEMHIAELPMVTSFYYDPDGVDCYPTNRSIRKLARLLPGLKK 141
            .:..|::...     |.|....:.|:.::: .:..|||  |...|        ..||.:..|.|.
plant    51 ARAGPHMLRR-----LASRFTQIVELDLSQ-SISRSFY--PGVTD--------SDLAVISEGFKF 99

  Fly   142 LRLTTPID------------GRYLSNFQHLQELHLYEDQHKAFELQQKYLDEVCRTLHDLRVLDI 194
            ||:....:            ||.||..|.|       |.....:|..|.|..|....||||.|.:
plant   100 LRVLNLHNCKGITDTGLASIGRCLSLLQFL-------DVSYCRKLSDKGLSAVAEGCHDLRALHL 157

  Fly   195 R-----TYDMISKLQ--------LGNCLQSFKNLTDLKLNLATLKPILPAVLELPSLRKLVVLLD 246
            .     |.:.:..|.        ||  ||...|:||  ..||.|         :...||:..|..
plant   158 AGCRFITDESLKSLSERCRDLEALG--LQGCTNITD--SGLADL---------VKGCRKIKSLDI 209

  Fly   247 NEWH------IPPLVSPDSYDHKIREVSEFYEIMAFKAKDIVGFAVDGYYMPLEPGWDEKLPIWT 305
            |:..      :..:....:...|..::.:.|::.......:..|.                    
plant   210 NKCSNVGDAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFC-------------------- 254

  Fly   306 HRRLKRLAICSWTHSAD---YLKRYTCMTELQLLCVRNWNDLSDEILLEFVELCPRLEHLDVSYC 367
             :.|:.|.|......:|   .|...:|...|:.|.:....::||..|...::.|..||.||:..|
plant   255 -KNLETLIIGGCRDISDESIMLLADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCC 318

  Fly   368 RNLTPTFL-------PRALSILKRREPFK-QKTGVGRSPPLKLYYDLSGFEDFVDRANLKSSLEY 424
            ..:|.|..       ...|.:||.....| ..||:|     ||....|..| ::|..:|....|.
plant   319 EEVTDTAFRDLGSDDVLGLKVLKVSNCTKITVTGIG-----KLLDKCSSLE-YIDVRSLPHVTEV 377

  Fly   425 RGYIVFTADFPVDSERGLSF 444
            |           .||.||.|
plant   378 R-----------CSEAGLEF 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7148NP_649366.1 F-box_SF 9..47 CDD:459239 9/34 (26%)
leucine-rich repeat 333..358 CDD:275381 6/24 (25%)
AT5G23340NP_197725.1 F-box_SF 9..46 CDD:459239 12/59 (20%)
leucine-rich repeat 68..99 CDD:275381 9/41 (22%)
AMN1 85..323 CDD:187754 59/286 (21%)
leucine-rich repeat 100..125 CDD:275381 5/24 (21%)
leucine-rich repeat 126..151 CDD:275381 7/31 (23%)
leucine-rich repeat 152..177 CDD:275381 5/24 (21%)
leucine-rich repeat 178..203 CDD:275381 10/37 (27%)
leucine-rich repeat 204..230 CDD:275381 2/25 (8%)
leucine-rich repeat 231..256 CDD:275381 3/45 (7%)
leucine-rich repeat 257..283 CDD:275381 6/25 (24%)
leucine-rich repeat 284..309 CDD:275381 6/24 (25%)
leucine-rich repeat 310..336 CDD:275381 7/25 (28%)
leucine-rich repeat 337..362 CDD:275381 9/29 (31%)

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