DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7148 and Fbxl20

DIOPT Version :9

Sequence 1:NP_649366.1 Gene:CG7148 / 40432 FlyBaseID:FBgn0046301 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_006534361.1 Gene:Fbxl20 / 72194 MGIID:1919444 Length:438 Species:Mus musculus


Alignment Length:345 Identity:71/345 - (20%)
Similarity:109/345 - (31%) Gaps:121/345 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SFARTCRRVQYICLSKWRTSHAYEQLDLEKWRVLLPNHEDLV--YFLTQMRPYIREMGGSSCLCS 94
            :||:.||.::.:.|:....:.......|.|:...| .|.||.  ..:|.|.......|     |.
Mouse   113 TFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKL-RHLDLASCTSITNMSLKALSEG-----CP 171

  Fly    95 ILKDLDEMHIAELPMVTSFYYDPDGVDCYPTNRSIRKLARLLPGLKKLRL--TTPIDGRYLSNF- 156
            :   |::::|:....||.     ||         |:.|.|...|||.|.|  .|.::...|... 
Mouse   172 L---LEQLNISWCDQVTK-----DG---------IQALVRGCGGLKALFLKGCTQLEDEALKYIG 219

  Fly   157 QHLQELHLYEDQHKAFELQQKYLDEVCRTLHDLRVLDIRTYDMISKLQLGNCLQSFKNLTDLKLN 221
            .|..||.....| ...::..:.|..:||..|.|:.|               |.....|:||..||
Mouse   220 AHCPELVTLNLQ-TCLQITDEGLITICRGCHKLQSL---------------CASGCSNITDAILN 268

  Fly   222 LATLKPILPAVLELPSLRKLVVLLDNEWHIPPLVSPDSYDHKIREVSEFYEIMAFKAKDIVGFAV 286
            ...        ...|.||                        |.||:...::..      |||..
Mouse   269 ALG--------QNCPRLR------------------------ILEVARCSQLTD------VGFTT 295

  Fly   287 DGYYMPLEPGWDEKLPIWTHRRLKRLAICSWTHSADYLKRYTCMTELQLLCVRNWNDLSDEILLE 351
                                                 |.| .| .||:.:.:.....::|..|::
Mouse   296 -------------------------------------LAR-NC-HELEKMDLEECVQITDSTLIQ 321

  Fly   352 FVELCPRLEHLDVSYCRNLT 371
            ....||||:.|.:|:|..:|
Mouse   322 LSIHCPRLQVLSLSHCELIT 341

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG7148NP_649366.1 leucine-rich repeat 333..358 CDD:275381 4/24 (17%)
Fbxl20XP_006534361.1 F-box-like 30..71 CDD:403981
leucine-rich repeat 67..94 CDD:275381
AMN1 95..291 CDD:187754 53/254 (21%)