DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7148 and CG5003

DIOPT Version :9

Sequence 1:NP_649366.1 Gene:CG7148 / 40432 FlyBaseID:FBgn0046301 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster


Alignment Length:244 Identity:60/244 - (24%)
Similarity:90/244 - (36%) Gaps:65/244 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 EDQHKAFELQQKYLDE--VCRTLH--DLRVLDIRTY-DMISKLQLGNCLQSFKNL---------T 216
            |.:||      :.||.  .|..:.  |..:.:|..| |..|.|.:.:|...|:||         .
  Fly    54 EKEHK------ESLDRETECNLMDFCDELLFEIFQYLDTSSILAVMHCSPRFENLLLDHRFYHHI 112

  Fly   217 DLK---LNLATLKPILPAVLELPSLRKLVVLLDNEWHIPPLVSPDSYDHKIREVSEFYE------ 272
            ||.   |.:..|:.||....|             :.|...:..|.|..|...|..:|.:      
  Fly   113 DLSNGPLPMGILEEILGRATE-------------KTHTIKICGPPSSQHVAGEFRQFTQTLSSVF 164

  Fly   273 --IMAFKAKDIVGFAVDGYYMPLEPGWDEKLPIWTHRRLKRLAICSWTHSADYLKRYTCMTELQL 335
              ::..|..::.|.::|..|:.:     .:.|. |.|||| |..|| ....|..|......||.|
  Fly   165 PRVVQLKVLELEGVSLDFEYIHI-----TEFPA-TLRRLK-LKDCS-VRVGDTPKSIFYSIELHL 221

  Fly   336 LCVRNWNDLSDE--------ILLEFVELCPRLEHLDVSYCRNLTPTFLP 376
            |   :..|||.|        .::...:| |.|..|.:..|:.|. .|:|
  Fly   222 L---DLEDLSIEDNSWFEPYYIMGLSKL-PSLRRLSLKGCQALC-KFVP 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7148NP_649366.1 leucine-rich repeat 333..358 CDD:275381 8/32 (25%)
CG5003NP_651593.1 F-box 68..114 CDD:279040 10/45 (22%)
leucine-rich repeat 610..635 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1046098at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.010

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