DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7148 and fbxl2

DIOPT Version :9

Sequence 1:NP_649366.1 Gene:CG7148 / 40432 FlyBaseID:FBgn0046301 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_956400.1 Gene:fbxl2 / 378737 ZFINID:ZDB-GENE-030925-12 Length:432 Species:Danio rerio


Alignment Length:393 Identity:72/393 - (18%)
Similarity:126/393 - (32%) Gaps:151/393 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SFARTCRRVQYI------------CLSKWRTSHAYEQLDLEKWRVLLPNHEDLVYFLTQMRPYIR 84
            :||:.||.::::            |:|..:.......|||... |.:.||               
Zfish   107 TFAQNCRNIEHLNLNGCTKITDSTCISLSKFCFKLRHLDLTSC-VSITNH--------------- 155

  Fly    85 EMGGSSCLCSILKDLDEMHIAELPMVTSFYYDPDGVDCYPTNRSIRKLARLLPGLKKLRLTTPID 149
               ....|....:.|:.::::....:||     ||::.  .:|....|..|.     ||..|.:|
Zfish   156 ---ALKALSEGCRMLENLNLSWCDQITS-----DGIEA--LSRGCTALRALF-----LRGCTQLD 205

  Fly   150 GRYLSNFQ-HLQELHLYEDQHKAFELQQKYLDEVCRTLHDLRVLDIRTYDMISKLQLGNCLQSFK 213
            ...|.:.| |..|| :..:.....::.......:||..|.|:::               |:....
Zfish   206 DTALKHLQKHCPEL-MTINMQSCTQITDDGFVSLCRGCHKLQMV---------------CISGCS 254

  Fly   214 NLTD-----LKLNLATLKPILPAV-------------------LELPSLRKLVVLLDN-----EW 249
            |:||     |.||...|| ||.|.                   :|...|.:.:::.||     ..
Zfish   255 NITDASLTALGLNCQRLK-ILEAARCSHVTDAGFTVLARNCHEMEKMDLEECILVTDNTLVQLSI 318

  Fly   250 HIPPLVSPDSYDHKIREVSEFYEIMAFKAKDIVGFAVDGYYMPLEPGWDEKLPIWTHRRLKRLAI 314
            |.|                                                       ||:.|::
Zfish   319 HCP-------------------------------------------------------RLQALSL 328

  Fly   315 CSWTHSAD----YLKRYTCMTE-LQLLCVRNWNDLSDEILLEFVELCPRLEHLDVSYCRNLTPTF 374
            .......|    :|....|..| ||::.:.|...::| |.||.::.|.|||.:::..|:.::...
Zfish   329 SHCELITDDGIRHLSSSVCGQERLQVVELDNCPLITD-ITLEHLKNCQRLERIELYDCQQVSRAG 392

  Fly   375 LPR 377
            :.|
Zfish   393 IKR 395

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG7148NP_649366.1 leucine-rich repeat 333..358 CDD:275381 8/24 (33%)
fbxl2NP_956400.1 F-box-like 24..66 CDD:289689
leucine-rich repeat 61..88 CDD:275381
AMN1 63..284 CDD:187754 46/224 (21%)