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Protein Alignment CG7148 and Fbxl2

DIOPT Version :9

Sequence 1:	NP_649366.1	Gene:	CG7148 / 40432	FlyBaseID:	FBgn0046301	Length:	454	Species:	Drosophila melanogaster
Sequence 2:	XP_038938600.1	Gene:	Fbxl2 / 363156	RGDID:	1562243	Length:	439	Species:	Rattus norvegicus

Alignment Length:	384	Identity:	79/384 - (20%)
Similarity:	134/384 - (34%)	Gaps:	119/384 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly    32 SFARTCRRVQYICL---SKWRTSHAYEQLDLEKWRVLLPNHEDLVYFLTQMRPYIREMGGSSCLC 93
            :||:.||.::::.|   :|...|..|.                    |::....::.:..:||:.
  Rat   114 TFAQNCRNIEHLNLNGCTKITDSTCYS--------------------LSRFCSKLKHLDLTSCVS 158

  Fly    94 ---SILKDLDE-------MHIAELPMVTSFYYDPDGVDCYPTNRSIRKLARLLPGLKKLRL--TT 146
               |.||.:.|       ::::....:|.     :|::.         |.|...|||.|.|  .|
  Rat   159 VTNSSLKGISEGCRNLEYLNLSWCDQITK-----EGIEA---------LVRGCRGLKALLLRGCT 209

  Fly   147 PIDGRYLSNFQ-HLQELHLYEDQHKAFELQ--QKYLD----EVCRTLHDLRVLDIRTYDMISKLQ 204
            .::...|.:.| |..||       .:..||  .:..|    ::||..|.|:.|
  Rat   210 QLEDEALKHIQNHCHEL-------VSLNLQSCSRITDDGVVQICRGCHRLQAL------------ 255

  Fly   205 LGNCLQSFKNLTDLKLNLATLKPILPAVLELPSLRKLV----VLLDNEWHIPPLVSPDSYDHKIR 265
               ||....||||..|....|......|||......|.    .||....|             ..
  Rat   256 ---CLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTLLARNCH-------------DL 304

  Fly   266 EVSEFYEIMAFKAKDIVGFAVDGYYMPLEPGWDEKLPIWTHRRLKRLAICSWTHSAD----YLKR 326
            |..:..|.:......::..::   :.|               :|:.|::.......|    :|..
  Rat   305 EKMDLEECVLITDSTLIQLSI---HCP---------------KLQALSLSHCELITDEGILHLSS 351

  Fly   327 YTCMTE-LQLLCVRNWNDLSDEILLEFVELCPRLEHLDVSYCRNLTPTFLPRALSILKR 384
            .||..| |::|.:.|...::| ..||.:|.|..||.|::..|:.:|...:.|..:.|.|
  Rat   352 STCGHERLRVLELDNCLLVTD-ASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPR 409

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.