DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7148 and Fbxo39

DIOPT Version :9

Sequence 1:NP_649366.1 Gene:CG7148 / 40432 FlyBaseID:FBgn0046301 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001034107.1 Gene:Fbxo39 / 303287 RGDID:1311464 Length:443 Species:Rattus norvegicus


Alignment Length:270 Identity:61/270 - (22%)
Similarity:100/270 - (37%) Gaps:79/270 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASEPRSLILQLDDDCLAEIFDRLQDLPSEVSFARTCRRVQYICLSKWRTSHAYEQLDL----EK 61
            ||:......|.|:.:|::   |.|.:..|| :.|.|.|.:...|       |.::....    ..
  Rat   220 MATFHNLTFLTLNYNCIS---DELLETLSE-NNAGTLRTMNIKC-------HVHDPHGQVVWGMS 273

  Fly    62 WRVLLPNHEDLV--YFLTQMRPYIREMGGSSCLCSILKDLDEMHIAELPMVTSFYYDPDGVDCYP 124
            |..|.....:|.  :|..::..|.|       |..||  |.|:.:..:.:.:.::.|||. ...|
  Rat   274 WAKLARQASNLKVNFFFERVMKYER-------LARIL--LQEIPVRSISLRSCYFSDPDW-SMRP 328

  Fly   125 TNRSIRKLARLLPGLKKLRLTTPIDGRYLSNFQHLQELHL-YEDQHKAFELQQKYLDEVCRTLHD 188
            |      |..|||..:..                ||:|.. :.:.|::.:.|...|...||.|..
  Rat   329 T------LTDLLPTFRNT----------------LQKLTFEFNNNHESLDEQLHLLILACRKLFY 371

  Fly   189 LRV---LDIRTYDMISKLQ-LGNCLQSFKNLTDLKLNL-----------ATLKPILPAVLELPSL 238
            .::   ||::..:.|.|.| .|.|     :|..||:.:           .||:.|         .
  Rat   372 FKIWAFLDVKFVERILKSQEEGQC-----SLRTLKVRIYTNRYETNEEDRTLREI---------Y 422

  Fly   239 RKLVVLLDNE 248
            ||...|:|:|
  Rat   423 RKYRKLIDSE 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7148NP_649366.1 leucine-rich repeat 333..358 CDD:275381
Fbxo39NP_001034107.1 F-box-like 16..57 CDD:403981
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1046098at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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