DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7148 and AMN1

DIOPT Version :9

Sequence 1:NP_649366.1 Gene:CG7148 / 40432 FlyBaseID:FBgn0046301 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001106873.1 Gene:AMN1 / 196394 HGNCID:27281 Length:258 Species:Homo sapiens


Alignment Length:214 Identity:47/214 - (21%)
Similarity:82/214 - (38%) Gaps:73/214 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 ISKLQLGNCLQSF-KNLTDLKLNLATLKPILPAVLELPSLRKLVVLLDNEWHIPPLVSPDSYDHK 263
            :|:| |..||..| ||::..   |..:||:.|.:.:     :|:.::..:..|.        |..
Human     7 VSQL-LDLCLWCFMKNISRY---LTDIKPLPPNIKD-----RLIKIMSMQGQIT--------DSN 54

  Fly   264 IREV-SEFYEIMAFKAKDIVGFAVDGYYMPLEPGWDEKLPIWTHRRLKRLAI------------- 314
            |.|: ....:.:..::.||...|:              |.:...|:||:|.:             
Human    55 ISEILHPEVQTLDLRSCDISDAAL--------------LHLSNCRKLKKLNLNASKGNRVSVTSE 105

  Fly   315 --------CSWTHSADYLKRYTCMTELQLLCVRNWNDLSDEILLEFVELCPRLEHLDVSYCRNLT 371
                    ||:.|.|. |||  |       |     :|:||.::.....|..|:.:|:..|.::|
Human   106 GIKAVASSCSYLHEAS-LKR--C-------C-----NLTDEGVVALALNCQLLKIIDLGGCLSIT 155

  Fly   372 PTFLPRALSILKRREPFKQ 390
            ..    :|..|.:..||.|
Human   156 DV----SLHALGKNCPFLQ 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7148NP_649366.1 leucine-rich repeat 333..358 CDD:275381 5/24 (21%)
AMN1NP_001106873.1 AMN1 37..257 CDD:187754 35/180 (19%)
leucine-rich repeat 63..86 CDD:275381 4/36 (11%)
leucine-rich repeat 87..116 CDD:275381 4/28 (14%)
leucine-rich repeat 117..142 CDD:275381 11/39 (28%)
leucine-rich repeat 143..168 CDD:275381 6/28 (21%)
leucine-rich repeat 169..195 CDD:275381 1/2 (50%)
leucine-rich repeat 196..221 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1046098at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.010

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