DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7148 and fbxl20

DIOPT Version :10

Sequence 1:NP_649366.1 Gene:CG7148 / 40432 FlyBaseID:FBgn0046301 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_004918731.1 Gene:fbxl20 / 100491064 XenbaseID:XB-GENE-979487 Length:516 Species:Xenopus tropicalis


Alignment Length:403 Identity:71/403 - (17%)
Similarity:119/403 - (29%) Gaps:156/403 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 EMGGSSCLC--SILKDLDEMHIAELPMVTSFYYDPDG---------------VDCYPTN------ 126
            :.|...|.|  ..||..:...:.|.|:.|.:::...|               :.|.|.|      
 Frog     5 DAGRCGCYCFGQKLKAWETGELPEYPVPTHWHFRAQGPGPSVTAPPPIGPHYIRCEPGNSGEKGP 69

  Fly   127 -----RSIRKLARLLPGLKKLRLTTPIDGRYLSNFQHLQELHLYEDQHKAFELQ-QKYLDEV--C 183
                 .:...:.|.:.|:.|.|         ...|.:..|..:.:...|...|: ..:||.|  |
 Frog    70 QHLVTHTAAPMRRDMNGVTKSR---------FEMFSNNDEALINKKLPKELLLRIFSFLDVVTLC 125

  Fly   184 RTLHDLRVLDIRTYD------------------------------MISKLQLGNCL--------- 209
            |.....|..::...|                              .:.||.|..||         
 Frog   126 RCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRT 190

  Fly   210 --QSFKNLTDLKLN------------------------LATLKPI----LPAVLE-LPSLRKLVV 243
              |:.:|:..|.||                        ||:...|    |.|:.| .|.|.:|.:
 Frog   191 FAQNCRNIEVLNLNGCTKITDATSTSLSKFCSKLRQLDLASCTSITNLSLKAISEGCPQLEQLNI 255

  Fly   244 LLDNEWHIPPLVSPDSYDHKIREV---------------SEFYEIMAFKAKDIVGFAVDGYYMPL 293
            ...::      :|.|.....::..               .|..:.:.....::|...:......:
 Frog   256 SWCDQ------ISKDGIQALVKGCGGLRLLSLKGCTQLEDEALKFIGSHCPELVTLNLQACSQQI 314

  Fly   294 EPGWDEKLPIWTHRRLKRLAICSWTHSADYLKRYTCMTELQLLCVRNWNDLSDEILLEFVELCPR 358
            .   |:.|          :.||...|            :||.||....::::|.||....:.|||
 Frog   315 T---DDGL----------ITICRGCH------------KLQSLCASGCSNITDSILNALGQNCPR 354

  Fly   359 LEHLDVSYCRNLT 371
            |..|:|:.|..||
 Frog   355 LRILEVARCSQLT 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7148NP_649366.1 F-box_SF 9..47 CDD:459239
leucine-rich repeat 333..358 CDD:275381 8/24 (33%)
fbxl20XP_004918731.1 F-box_FBXL2-like 101..145 CDD:438887 9/43 (21%)
leucine-rich repeat 144..171 CDD:275381 0/26 (0%)
AMN1 172..369 CDD:187754 44/227 (19%)
leucine-rich repeat 172..197 CDD:275381 6/24 (25%)
leucine-rich repeat 198..220 CDD:275381 3/21 (14%)
leucine-rich repeat 224..249 CDD:275381 6/24 (25%)
leucine-rich repeat 250..275 CDD:275381 4/30 (13%)
leucine-rich repeat 276..301 CDD:275381 1/24 (4%)
AMN1 299..474 CDD:187754 22/94 (23%)
leucine-rich repeat 302..328 CDD:275381 6/50 (12%)
leucine-rich repeat 329..354 CDD:275381 8/24 (33%)
leucine-rich repeat 355..380 CDD:275381 6/13 (46%)
leucine-rich repeat 381..406 CDD:275381
leucine-rich repeat 407..429 CDD:275381
leucine-rich repeat 436..455 CDD:275381
leucine-rich repeat 461..486 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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