DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7148 and fbxl20

DIOPT Version :10

Sequence 1:NP_649366.1 Gene:CG7148 / 40432 FlyBaseID:FBgn0046301 Length:454 Species:Drosophila melanogaster
Sequence 2:XP_002664757.2 Gene:fbxl20 / 100331130 ZFINID:ZDB-GENE-081031-27 Length:436 Species:Danio rerio


Alignment Length:359 Identity:66/359 - (18%)
Similarity:111/359 - (30%) Gaps:149/359 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SFARTCRRVQYICL---SKWRTSHAYEQLDLEKWRVLLPNHEDLVYFLTQMRPYIREMGGSSCL- 92
            :||:.||.::.:.|   :|...|....                    |::..|.::.:..:||. 
Zfish   111 TFAQNCRNIELLSLNGCTKITDSTCNS--------------------LSKFCPKLKHLDLASCTS 155

  Fly    93 ------------CSILKDLDEMHIAELPMVTSFYYDPDGVDCYPTNRSIRKLARLLPGLKKLRL- 144
                        |.:   |::::|:....||.     ||         |:.|.|..||||.|.| 
Zfish   156 ITNLSLKALSEGCPL---LEQLNISWCDQVTK-----DG---------IQALVRCCPGLKGLFLK 203

  Fly   145 -TTPIDGRYLSNF-QHLQELHLYEDQHKAFELQQKYLDEVCRTLHDLRVLDIRTYDMISKLQLGN 207
             .|.::...|.:. .|..||.....| ...::..:.|..:||..|.|:.|               
Zfish   204 GCTQLEDEALKHIGGHCPELVTLNLQ-TCSQITDEGLITICRGCHRLQSL--------------- 252

  Fly   208 CLQSFKNLTDLKLNLATLKPILPAVLELPSLRKLVVLLDNEWHIPPLVSPDSYDHKIREVSEFYE 272
            |:....|:||..||...        ...|.||                        |.||:...:
Zfish   253 CVSGCANITDAILNALG--------QNCPRLR------------------------ILEVARCSQ 285

  Fly   273 IMAFKAKDIVGFAVDGYYMPLEPGWDEKLPIWTHRRLKRLAICSWTHSADYLKRYTCMTELQLLC 337
            :..      |||.                           ::....|..:.:....|:       
Zfish   286 LTD------VGFT---------------------------SLARNCHELEKMDLEECV------- 310

  Fly   338 VRNWNDLSDEILLEFVELCPRLEHLDVSYCRNLT 371
                 .::|..|::....||||:.|.:|:|..:|
Zfish   311 -----QITDATLIQLSIHCPRLQVLSLSHCELIT 339

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG7148NP_649366.1 F-box_SF 9..47 CDD:459239 5/17 (29%)
leucine-rich repeat 333..358 CDD:275381 3/24 (13%)
fbxl20XP_002664757.2 F-box_FBXL2-like 22..66 CDD:438887
leucine-rich repeat 65..92 CDD:275381
AMN1 93..289 CDD:187754 51/268 (19%)