DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF2A and Eif2a

DIOPT Version :10

Sequence 1:NP_649365.1 Gene:eIF2A / 40431 FlyBaseID:FBgn0037135 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_001386747.1 Gene:Eif2a / 502531 RGDID:1589591 Length:581 Species:Rattus norvegicus


Alignment Length:638 Identity:241/638 - (37%)
Similarity:351/638 - (55%) Gaps:77/638 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PTLAIRSSVAVELWSSAGSKQPFEHKPHLPREETKSSRSICFSSNGRYFAYSNGQEVKVLQASRD 74
            |.|.:|.|..:.:   ......|.....||||..|:.:...||.:|..||:|||::|.::     
  Rat     6 PLLTVRGSEGLYM---VNGPPHFTESTVLPREPGKNCKVYTFSKDGTLFAWSNGEKVNII----- 62

  Fly    75 SAASWPVICVLPRPKAFYLQFSPRGSYLCTWEHYAITKDRPEGSPNLLVYEVATGVEVFAIVQKN 139
            :.|:..::.....|||..|:|||..:.|.||:.|..:||...|:|||.:|:|.||..:.:.:||.
  Rat    63 NVANKGLLHSFDLPKAVCLEFSPNNTVLATWQPYTTSKDGTAGTPNLQLYDVKTGTCLKSFIQKK 127

  Fly   140 QADWQPSWSADESIFALVVGGEALFYDLGEGAEKGFATTSRKIGGSRGGMLSLGPGNCPPFLAFY 204
            ..:|.||||.||.|.|..|..|..|::     ...|.|.:.|:...:....:|.||..|..:|.|
  Rat   128 MQNWCPSWSDDEIICARNVNNEVHFFE-----NNNFNTIANKLHLQKVNDFNLSPGTQPFKVAVY 187

  Fly   205 TPGAKGAPSMCKLYKYPAL-GQNQTVACKSFFQADRVEMLWNKRGSGLLLLTSTEVDKSGASYYG 268
            .||:|||||..:||:||.. |....:|.||||:||:|.|||||:.:.:|::.||:|||:||||||
  Rat   188 VPGSKGAPSFVRLYQYPNFAGPQAALANKSFFKADKVTMLWNKKATAVLVIASTDVDKTGASYYG 252

  Fly   269 NQAVHFMATKGDTCSVPLSKEGPVHCVKWSPKATEFVVVYGFMPSKAALYNLKCDVVFDFGEGPR 333
            .|.:|::||.|::..|.|.|.||::.|.|:|.:|||..||||||:||.::|||||.|||||.|||
  Rat   253 EQTLHYIATNGESAVVQLPKNGPIYDVAWNPSSTEFCAVYGFMPAKATVFNLKCDPVFDFGTGPR 317

  Fly   334 NCAYFNPFGNLIALAGFGNLPGAVEVWDVSKREKLANLKCADTTVFEWHPNGEWFVTATTAPRLR 398
            |.|:::|.|:::.|||||||.|.:|||||...:.::....:|:|.|.|.|:||..:|||.|||||
  Rat   318 NAAFYSPHGHILVLAGFGNLRGQMEVWDVKNYKLISKPVASDSTYFAWCPDGEHILTATCAPRLR 382

  Fly   399 ISNGFKVYHYSGALLHETMWPQGQELLGIEWQQFADKTFSEPKITKAKHEGIKSSQPEASKK--- 460
            ::||:|::||:|:||::...|...||..:.||.|.|..|....||   ::.:.|..|....|   
  Rat   383 VNNGYKIWHYTGSLLYKYDVPSNGELWQVSWQPFLDGIFPAKTIT---YQAVPSEVPSEEPKVAT 444

  Fly   461 AYTPPHLR-------LLKEGKNPEKYLPQPSI-PGLAPTAAAGGVNGNKRNNKNKQRSARKDVNV 517
            ||.||.||       .|.|.:.|:...|.||. ..|:.||..     |:|.::.|:.:.::..| 
  Rat   445 AYRPPALRNKPVTSSKLHEEEPPQNMKPHPSSDKPLSKTALK-----NQRKHEAKKAAKQEARN- 503

  Fly   518 VNGGDADSAPTEVVDQAAPVARQSPVFVAAEERKPQHTPRQKYQPDNAADQPPNSYGQGHPNGQH 582
                  |.|||.|                     ||..||.......:.|               
  Rat   504 ------DLAPTPV---------------------PQSAPRSTVTQSASGD--------------- 526

  Fly   583 ISDKERKIRSVAKKLSDIKKLKVRRSQGENLELNQLNKIKMEAQYLDELKALK 635
             .:.::||:::.|||..|::||.:.:.|:.||.|||.||:.|...|.||:.|:
  Rat   527 -PEVDKKIKNLKKKLKAIEQLKEQAAAGKQLEKNQLEKIQKETALLQELEDLE 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF2ANP_649365.1 COG5354 13..636 CDD:227657 239/635 (38%)
eIF2A 232..418 CDD:462552 101/185 (55%)
WD40 repeat 292..327 CDD:293791 20/34 (59%)
WD40 repeat 334..371 CDD:293791 17/36 (47%)
WD40 repeat 376..399 CDD:293791 13/22 (59%)
Eif2aNP_001386747.1 COG5354 44..567 CDD:227657 226/584 (39%)
eIF2A 216..411 CDD:462552 104/194 (54%)
WD40 repeat 277..311 CDD:293791 20/33 (61%)
WD40 repeat 318..352 CDD:293791 17/33 (52%)
WD40 repeat 360..401 CDD:293791 22/40 (55%)

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