DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycH and Ccnq

DIOPT Version :9

Sequence 1:NP_524207.1 Gene:CycH / 40429 FlyBaseID:FBgn0022936 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_932106.1 Gene:Ccnq / 69109 MGIID:1916359 Length:250 Species:Mus musculus


Alignment Length:196 Identity:36/196 - (18%)
Similarity:76/196 - (38%) Gaps:38/196 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 MPKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEFNVSINQFVNNIKGDRNKAT-- 137
            |....:.||...:.:|:...:...|....:..:.:::|.||||.::.....:|......|..:  
Mouse    45 MQSIPIATACTIYHKFFCEINLDAYDLYLVAMSSIYLAGKVEEQHLRTRDIINVSHRYFNPGSEP 109

  Fly   138 -----------DIVLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIKTRSNMQNPDRLRPHIDSF- 190
                       |.::..|||::..|.:.::..:|.:.:..:||.:|...|..:..|....:.:: 
Mouse   110 LELDSRFWELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLISLKNWLNRYSWQRTPISVTAWA 174

  Fly   191 -IDSTYYSDACLLHTPSQIALAAVLHA---------ASREQEN--------------LDSYVTDL 231
             :..:|:...||......:|:|.:..|         |..|.|.              :|:.|:||
Mouse   175 LLRDSYHGGLCLRFQAQHLAVAVLYLALQVYGVEVPAEGEAEKPWWQVFSDDLTKPIIDNIVSDL 239

  Fly   232 L 232
            :
Mouse   240 I 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycHNP_524207.1 ccl1 2..307 CDD:129660 36/196 (18%)
CYCLIN 63..>127 CDD:238003 10/51 (20%)
Cyclin_C_2 159..257 CDD:293504 19/99 (19%)
CcnqNP_932106.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
CYCLIN 34..131 CDD:238003 16/85 (19%)
CCL1 35..248 CDD:227640 36/196 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5333
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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