Protein Alignment CycH and ccnl1a

DIOPT Version :9

• Sequence 1: NP_524207.1
• Gene: CycH / 40429
• FlyBaseID: FBgn0022936
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_001082832.1
• Gene: ccnl1a / 553269
• ZFINID: ZDB-GENE-050419-206
• Length: 534
• Species: Danio rerio
• Alignment Length: 276
• Identity: 64/276 - (23%)
• Similarity: 115/276 - (41%)
• Gaps: 57/276 - (20%)

  Fly    75 MPKCVVGTAFHYFKRFYLNNSPMDYHPKEILA-TCVFVACKVEEFNVSINQFVN------NIKGD 132
            :|:..:.|....|.||:.:.|.:. |..||:| .||.:|.|:||....|...:|      .::|.
Zfish    82 LPQVAMATGQVLFHRFFYSKSFVK-HSFEIVAMACVNLASKIEEAPRRIRDVINVFHHLRQLRGK 145

  Fly   133 RNKATDI-----------VLSNELLLIGQLNYYLTIHNPFRPIEGFL---------IDIKTRSNM 177
            |:.:..|           |:..|..::.:|.:.:.:.:|.:.|..:|         ..::|..|.
Zfish   146 RSPSPLILDQNYINTKNQVIKAERRILKELGFCVHVKHPHKIIVMYLQVLECEKNQTLVQTAWNY 210

  Fly   178 QNPDRLRPHIDSFIDSTYYSDACLLHTPSQIALAAVLHAASREQENLDSY-VTDLLFVSAREKLP 241
            .| |.||.::  |:.....:.||          |.:..||...|.:|.|. :..|||.:..|::.
Zfish   211 MN-DSLRTNV--FVRFQAETIAC----------ACIYLAARVLQISLPSRPIWYLLFGATEEEIK 262

  Fly   242 GLIDAVRKIRIMVKQYQQPDREKVKAIEKKLDKCRNQANNPDSELYKERLRRLYTDEDDMPAEDA 306
            .:.....|:...    ::|:.:   .:||::|| |..|      :...:|:....:.|..|| ..
Zfish   263 DICTTTLKLYTR----RKPNYD---LLEKEVDK-RKMA------IQDAKLKAKGLNPDGTPA-IC 312

  Fly   307 SFHIADVSSDTSAMNI 322
            ||.....:|..|:.||
Zfish   313 SFGGFSPASKPSSPNI 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycH	NP_524207.1	ccl1	2..307	CDD:129660	58/259 (22%)
		CYCLIN	63..>127	CDD:238003	17/52 (33%)
		Cyclin_C_2	159..257	CDD:293504	23/107 (21%)
ccnl1a	NP_001082832.1	CYCLIN	65..137	CDD:238003	18/55 (33%)
		CYCLIN	188..264	CDD:214641	21/88 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170584014
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5333
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.740