Protein Alignment CycH and Ccnt2

DIOPT Version :9

• Sequence 1: NP_524207.1
• Gene: CycH / 40429
• FlyBaseID: FBgn0022936
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_001100641.1
• Gene: Ccnt2 / 304758
• RGDID: 1309205
• Length: 722
• Species: Rattus norvegicus
• Alignment Length: 244
• Identity: 56/244 - (22%)
• Similarity: 99/244 - (40%)
• Gaps: 48/244 - (19%)

  Fly    51 AEERLLLKQYEIYLF-DFCRRFEPTMPKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACK 114
            |:|.|..:|....|. |..:|.  .:.:..:.||..|..|||:::|...::...|..|.:|:|.|
  Rat    30 ADEELSHRQQAANLIQDMGQRL--NVSQLTINTAIVYMHRFYMHHSFTKFNRNIISPTALFLAAK 92

  Fly   115 VEEFNVSINQFVN-------------NIKGDR--NKATDIVLSNELLLIGQLNYYLTIHNPFRPI 164
            |||....:...:.             :.|.|.  .:..::||. |.:::..|.:.:||.:|...:
  Rat    93 VEEQARKLEHVIKVAHACLHPLEPLLDTKCDAYLQQTQELVLL-ETIMLQTLGFEITIEHPHTDV 156

  Fly   165 EGFLIDIK-TRSNMQNPDRLRPHIDSFIDSTYYSDACLLHTPSQIALAAVLHAASREQ------- 221
                  :| |:....:.|..:.......:|.:.:..||.:.|:.||...: |.|.:..
  Rat   157 ------VKCTQLVRASKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCI-HLACKWSNWEIPVS 214

  Fly   222 -------ENLDSYVT-DLL------FVSAREKLPGLIDAVRKIRIMVKQ 256
                   |.:|..|| :||      |:...||.|..:..:|..|.|.|:
  Rat   215 TDGKHWWEYVDPTVTLELLDELTHEFLQILEKTPSRLKRIRNWRAMAKK 263

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycH	NP_524207.1	ccl1	2..307	CDD:129660	56/244 (23%)
		CYCLIN	63..>127	CDD:238003	18/64 (28%)
		Cyclin_C_2	159..257	CDD:293504	26/120 (22%)
Ccnt2	NP_001100641.1	CCL1	8..>216	CDD:227640	42/195 (22%)
		CYCLIN	36..108	CDD:238003	19/73 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5333
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810