DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CycH and Ccnq

DIOPT Version :9

Sequence 1:	NP_524207.1	Gene:	CycH / 40429	FlyBaseID:	FBgn0022936	Length:	324	Species:	Drosophila melanogaster
Sequence 2:	NP_001020583.1	Gene:	Ccnq / 303321	RGDID:	1305651	Length:	250	Species:	Rattus norvegicus

Alignment Length:	196	Identity:	36/196 - (18%)
Similarity:	76/196 - (38%)	Gaps:	38/196 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    75 MPKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEFNVSINQFVNNIKGDRNKAT-- 137
            |....:.||...:.:|:...:...|....:..:.:::|.||||.::.....:|......|..:
  Rat    45 MQSIPIATACTIYHKFFCEINLDAYDLYLVAMSSLYLAGKVEEQHLRTRDIINVSHRYFNPGSEP 109

  Fly   138 -----------DIVLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIKTRSNMQNPDRLRPHIDSF- 190
                       |.::..|||::..|.:.::..:|.:.:..:||.:|...|..:..|....:.::
  Rat   110 LELDSRFWELRDSIVQCELLMLRVLRFQVSFQHPHKYLLHYLISLKNWLNRYSWQRTPISVTAWA 174

  Fly   191 -IDSTYYSDACLLHTPSQIALAAVLHA---------ASREQEN--------------LDSYVTDL 231
             :..:|:...||......:|:|.:..|         |..|.|.              :|:.|:||
  Rat   175 LLRDSYHGGLCLRFQAQHLAVAVLYLALQVYGVEVPAEGEAEKPWWQVFSDDLTKPIIDNIVSDL 239

  Fly   232 L 232
            :
  Rat   240 I 240

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CycH	NP_524207.1	ccl1	2..307	CDD:129660	36/196 (18%)
		CYCLIN	63..>127	CDD:238003	10/51 (20%)
		Cyclin_C_2	159..257	CDD:293504	19/99 (19%)
Ccnq	NP_001020583.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1..22
		CYCLIN_CCNM_CCNQ_rpt1	29..137	CDD:410237	17/91 (19%)
		CYCLIN_CCNM_CCNQ_rpt2	142..245	CDD:410238	19/99 (19%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5333
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810