Protein Alignment CycH and koko

DIOPT Version :9

• Sequence 1: NP_524207.1
• Gene: CycH / 40429
• FlyBaseID: FBgn0022936
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_732338.1
• Gene: koko / 14462485
• FlyBaseID: FBgn0264816
• Length: 259
• Species: Drosophila melanogaster
• Alignment Length: 241
• Identity: 48/241 - (19%)
• Similarity: 96/241 - (39%)
• Gaps: 49/241 - (20%)

  Fly    62 IYLFDFCR---RFEPTMPKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKV-EEFNVSI 122
            :|:|: |.   :.:|....| ....||   ||:......||....|.|..:::|.|: |:.:|.|
  Fly    38 MYIFE-CAAKLKMKPLTAAC-AAIVFH---RFFREVKASDYDEFLIAAGSLYLAGKIKEDESVKI 97

  Fly   123 NQFVN---------NIKGDRN----KATDIVLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIK-- 172
            ...:|         |...|.|    ...|.::..|||:...|.:.|.|....:.:..::..::
  Fly    98 RDVINVAYCTLNRGNDPVDLNDEYWSMRDAIVQAELLITRTLCFDLNIDLAHKYLLHYMKTLQDW 162

  Fly   173 TRSNMQNPDRLRPHIDSFIDSTYYSDACLLHTPSQIALAAVLHAASREQENLDSY-----VTDLL 232
            ..:.:.|...:.....|::...::|...|.:.|:.:|:..:..|       |.:|     :||..
  Fly   163 VGTEVWNSVPIAKAAASYLQDFHHSANILKYKPTHVAIGCLSLA-------LQTYGIQVPLTDES 220

  Fly   233 FVSAREKLPGLIDAVRKIRIMVKQYQQPDREKVKAIEKKLDKCRNQ 278
            ..||....|           :||.:.:.::.::  ||..::..:|:
  Fly   221 DESAMWYKP-----------LVKDFTRENQWEI--IENVIEVYKNE 253

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycH	NP_524207.1	ccl1	2..307	CDD:129660	48/241 (20%)
		CYCLIN	63..>127	CDD:238003	18/67 (27%)
		Cyclin_C_2	159..257	CDD:293504	16/104 (15%)
koko	NP_732338.1	Cyclin_N	6..144	CDD:278560	27/110 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45453873
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10026
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940