Protein Alignment CycH and Ccnc

DIOPT Version :9

• Sequence 1: NP_524207.1
• Gene: CycH / 40429
• FlyBaseID: FBgn0022936
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_001093942.1
• Gene: Ccnc / 114839
• RGDID: 70905
• Length: 283
• Species: Rattus norvegicus
• Alignment Length: 298
• Identity: 78/298 - (26%)
• Similarity: 125/298 - (41%)
• Gaps: 60/298 - (20%)

  Fly     5 SSQKRSWTFANEGQLMEFRVEQNSKYIESHEEEAQGRDLNEHFLTSAEERLLLKQYEIYLFDFCR 69
            ||....|....:..|.|  .:::.|:: |.||..:.:....:.:.:..|.|.|:|.
  Rat     8 SSHYLQWILDKQDLLKE--RQKDLKFL-SEEEYWKLQIFFTNVIQALGEHLKLRQQ--------- 60

  Fly    70 RFEPTMPKCVVGTAFHYFKRFYLNNSPMDYHPKEILATCVFVACKVEEFNVSIN----------- 123
                     |:.||..||||||...|.....|..:..||||:|.|||||.|..|
  Rat    61 ---------VIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTRLIAATTSVL 116

  Fly   124 --QFVNNIKGDRNKATDIVLSNELLLIGQLNYYLTIHNPFRPIEGFLIDIKTRSNMQNPDRLRPH 186
              :|......:.....:.:|..|..|:..::..|.:::|:||:..::.|      |...|.|.|.
  Rat   117 KTRFSYAFPKEFPYRMNHILECEFYLLELMDCCLIVYHPYRPLLQYVQD------MGQEDVLLPL 175

  Fly   187 IDSFIDSTYYSDACLLHTPSQIALAAVLHAASREQENLDSYVTDLLFVSAREKLPGLIDAVRK-- 249
            ....::.||.:|.|||:.|..||||. ||.|...|:.           .||:....|...:.|
  Rat   176 AWRIVNDTYRTDLCLLYPPFMIALAC-LHVACVVQQK-----------DARQWFAELSVDMEKIL 228

  Fly   250 --IRIMVKQYQQ----PDREKVKAIEKKLDKCRNQANN 281
              ||:::|.|:|    .:|:::..|..|:.|.:...|:
  Rat   229 EIIRVILKLYEQWKNFDERKEMATILSKMPKPKPPPNS 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycH	NP_524207.1	ccl1	2..307	CDD:129660	78/298 (26%)
		CYCLIN	63..>127	CDD:238003	24/76 (32%)
		Cyclin_C_2	159..257	CDD:293504	30/101 (30%)
Ccnc	NP_001093942.1	CYCLIN_CCNC_rpt1	40..146	CDD:410217	31/123 (25%)
		CYCLIN_CCNC_rpt2	154..245	CDD:410218	32/108 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5333
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810