DRSC/TRiP Functional Genomics Resources

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Protein Alignment eg and nr3c2

DIOPT Version :10

Sequence 1:NP_524206.1 Gene:eg / 40428 FlyBaseID:FBgn0000560 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_001093873.1 Gene:nr3c2 / 562171 ZFINID:ZDB-GENE-060531-23 Length:970 Species:Danio rerio


Alignment Length:105 Identity:39/105 - (37%)
Similarity:55/105 - (52%) Gaps:14/105 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAG-----CKHNGDCVINKKNRTACKACR 62
            ::|.|||:.|:|.|:|..||..||.||.|      |:.|     |....||:|:|..|..|.|||
Zfish   599 KVCLVCGDEASGCHYGVVTCGSCKVFFKR------AVEGQHNYLCAGRNDCIIDKIRRKNCPACR 657

  Fly    63 LRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQTTSGLGG 102
            :||||..||: .|:|..::..  ||..:.::....|...|
Zfish   658 VRKCLQAGMN-LGARKSKKLG--KIKSISEDSSLQSSKDG 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
egNP_524206.1 NR_DBD_like 3..87 CDD:413390 35/88 (40%)
nr3c2NP_001093873.1 PHA03307 127..>340 CDD:223039
NR_DBD_GR_PR 597..674 CDD:143546 35/81 (43%)
NR_LBD_MR 723..970 CDD:132760
Blue background indicates that the domain is not in the aligned region.

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