DRSC/TRiP Functional Genomics Resources

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Protein Alignment eg and LOC4577884

DIOPT Version :10

Sequence 1:NP_524206.1 Gene:eg / 40428 FlyBaseID:FBgn0000560 Length:373 Species:Drosophila melanogaster
Sequence 2:XP_001230804.2 Gene:LOC4577884 / 4577884 VectorBaseID:AGAMI1_005804 Length:537 Species:Anopheles gambiae


Alignment Length:429 Identity:143/429 - (33%)
Similarity:196/429 - (45%) Gaps:123/429 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCKHNGDCVINKKNRTACKACRLRK 65
            |||.|||||||||||||||||||||||||||:|||:::|:.||:||:|:||||||||||||||||
Mosquito     1 MNQQCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNLSSISECKNNGECIINKKNRTACKACRLRK 65

  Fly    66 CLLVGMSKSGSRYGRRSNWFKIHCLLQEQQTTSGLGG-----GSSVGSGSG---GG--------- 113
            ||:|||||||||||||||||||||||||||..:...|     ...||..:|   ||         
Mosquito    66 CLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQAAQQQGNHQKPSQPVGIHAGMFHGGYPHGMYPRP 130

  Fly   114 ------VSSASLEQLARLQQAS----------NQARQTYQDKTNPCIKSATATTSPRIEGAAVGT 162
                  :....||:.::...||          :.:.....|:.|..::......||..:...:..
Mosquito   131 PCTKEELMLLGLEEYSKHPSASPSVSSPDSHNSDSSNEINDRRNALLRQGKLHDSPINKDLFLPL 195

  Fly   163 GIGG---GASPSFLQAAKL-----------HHQRQL--KLDSRLSNTPSD--SGASSAGDPNEDG 209
            ..||   ...|.||.::.|           |.|..|  ..|:.|: .||.  :..:|...||.:.
Mosquito   196 PFGGLPLMPPPGFLPSSHLMFPGFHPALYSHPQAGLLKPADTHLT-LPSSPLANNNSRFTPNHNT 259

  Fly   210 VTSVLGGQIATPSSTNATSLPKLDLRHPNFPATSE----PDADMQRQRHQELLEIFRSHSEPLYS 270
            ..||                      ||...:.::    |::..:|....::||..|..|.....
Mosquito   260 DQSV----------------------HPTAGSGNDNGKSPESFSKRYILDQVLESQRCPSNGTTG 302

  Fly   271 SFAPFSHLPPVLLAAGVPQLPIFKDQFKAELLFPTTSSPELEEPIDLSFRSRADPASPM--AHNS 333
            |                     .||:.::|.:.|.|.:|               |.||:  |...
Mosquito   303 S---------------------DKDEPESEEVVPATMTP---------------PRSPIVSAPQQ 331

  Fly   334 NSPSLSEPAAASHCLGESTNFVRKSTPLDLTLVRSQTLT 372
            |:...:.|..:||       .:::..|:||::....:.|
Mosquito   332 NTIVRNSPTPSSH-------RIQQDNPIDLSMKTGSSCT 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
egNP_524206.1 NR_DBD_like 3..87 CDD:413390 72/83 (87%)
LOC4577884XP_001230804.2 None

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