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Protein Alignment eg and nhr-179
DIOPT Version :9
Sequence 1: | NP_524206.1 |
Gene: | eg / 40428 |
FlyBaseID: | FBgn0000560 |
Length: | 373 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001256000.1 |
Gene: | nhr-179 / 184562 |
WormBaseID: | WBGene00017512 |
Length: | 440 |
Species: | Caenorhabditis elegans |
Alignment Length: | 84 |
Identity: | 36/84 - (42%) |
Similarity: | 49/84 - (58%) |
Gaps: | 1/84 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MNQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAGCK-HNGDCVINKKNRTACKACRLR 64
:::.|:||.:|..|||||||||..|.:||.|.:.::.....|: .||.||..|..|..||.|||.
Worm 27 IHEKCRVCDQPGHGFHFGAFTCRACSAFFRRAHFSLVTERKCRLSNGRCVPTKGGRWFCKKCRLA 91
Fly 65 KCLLVGMSKSGSRYGRRSN 83
||...||:....:|.|.:|
Worm 92 KCSEAGMNSRNIQYDRDAN 110
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
eg | NP_524206.1 |
NR_DBD_like |
3..87 |
CDD:295381 |
36/82 (44%) |
nhr-179 | NP_001256000.1 |
ZnF_C4 |
30..99 |
CDD:197701 |
32/68 (47%) |
HOLI |
227..399 |
CDD:214658 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1136195at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.920 |
|
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