DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment eg and nhr-59

DIOPT Version :9

Sequence 1:	NP_524206.1	Gene:	eg / 40428	FlyBaseID:	FBgn0000560	Length:	373	Species:	Drosophila melanogaster
Sequence 2:	NP_503624.2	Gene:	nhr-59 / 178707	WormBaseID:	WBGene00003649	Length:	416	Species:	Caenorhabditis elegans

Alignment Length:	144	Identity:	49/144 - (34%)
Similarity:	66/144 - (45%)	Gaps:	13/144 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MNQ-LCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNIAAIAG----CKH-NGDCVINKKNRTACK 59
            :|| .|:|||:.:.|.||||.||..|.:||.|    :||.|.    ||. .|.|.|....|:.||
Worm    15 VNQTFCQVCGQESHGAHFGAITCRACAAFFRR----VAAGANFEVKCKDGRGRCKILTNGRSCCK 75

  Fly    60 ACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQQTTSGLGGGSSVGSGSGGGVSSASLEQLAR 124
            .|||:||..:||.....::.|.|  |.....:....:|. ||....:.|.|.|..:|.|..:...
Worm    76 KCRLKKCKDIGMDIQNFQFNRDS--FATSTKVAPSLSTF-LGRPEFLLSCSPGTSASTSQNKFID 137

  Fly   125 LQQASNQARQTYQD 138
            |.......:|...|
Worm   138 LSPFIKNCKQVLMD 151

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
eg	NP_524206.1	NR_DBD_like	3..87	CDD:295381	37/89 (42%)
nhr-59	NP_503624.2	ZnF_C4	20..>71	CDD:197701	23/54 (43%)
nhr-59	NP_503624.2	Hormone_recep	182..392	CDD:278530
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1136195at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010