DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syn1 and SLC9A3R2

DIOPT Version :9

Sequence 1:NP_001262192.1 Gene:Syn1 / 40424 FlyBaseID:FBgn0037130 Length:627 Species:Drosophila melanogaster
Sequence 2:XP_016879383.1 Gene:SLC9A3R2 / 9351 HGNCID:11076 Length:372 Species:Homo sapiens


Alignment Length:500 Identity:96/500 - (19%)
Similarity:139/500 - (27%) Gaps:192/500 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SPSPS----GLRCGNMETRVRGAWYRVLVTLETDFLAVSLDES----CEAAQPSNDGQSTTLNGT 79
            ||.||    |||.|     |||                  |.|    |........|    |.|.
Human     2 SPPPSGGPWGLRAG-----VRG------------------DSSAGGGCVVGARCLRG----LPGF 39

  Fly    80 LGSNHSGGGGG-----GAG--------GGGTGGGGQNGTLPNSASLQGMNIQDTELDGSASNDNG 131
            .||..||...|     |.|        |.|.|.|     ||.::.|..:..:.:.:.|:....: 
Human    40 PGSCSSGASTGPSCVLGPGLLPVPSALGPGAGQG-----LPAASFLPFLGRKPSWVGGARLEPS- 98

  Fly   132 DRDPCLNNNNNAGDGGGM--------DMCDVPDHVANQKRHVRIIKSDNNGLGISIKGGRENRMP 188
                         .|.|:        |.......:..:....|.:......||.....|...|.|
Human    99 -------------QGSGLSHHPAPQSDSAPTSPPIPGEPGPQREVDKWGGSLGRPESSGHPGRTP 150

  Fly   189 ILISKIFRGMAADQAKGLYVGDAILTVNGEELRDATHDEAVRALKRSGRVVDLEVKFLREVTPYF 253
                                              ||.......:.|||           ..||..
Human   151 ----------------------------------ATCCHCAAVMARSG-----------SATPPA 170

  Fly   254 RKASIISEVGWELQRAFLCPLGPGVPTSPPAPKTTPRADTRYIPLQLTHLARNLKYIDPENRCFE 318
            |                    .||.|...|..:.......|.:..:|.||.:.     |:...|.
Human   171 R--------------------APGAPPRSPPQRLDVSGPLRELRPRLCHLRKG-----PQGYGFN 210

  Fly   319 LHSPDGVHSCILRAAD-----------SAEALVWFN-----ALHSAMGTSTQRALAEANRALT-- 365
            |||........:|:.|           :.:.|:..|     .|..|...::.:|..:..|.|.  
Human   211 LHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVD 275

  Fly   366 ----------NLIGELKHI-GWLSKRMSGGGSSGSAGGGAASGGSGTSNSVVAGELVSPSGRSSS 419
                      .:....:|: |.|...::.|.|.....||:|.    :|.|.:.|         |.
Human   276 PETDEHFKRLRVTPTEEHVEGPLPSPVTNGTSPAQLNGGSAC----SSRSDLPG---------SD 327

  Fly   420 ESSDESDKWL-PIFVAVTE--REFRIYESAPWSVEAWSRPLEIYA 461
            :.::||...| |......|  |..|:.:.||..  .|:|..||::
Human   328 KDTEESGLHLSPTAAEAKEKARAMRVNKRAPQM--DWNRKREIFS 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syn1NP_001262192.1 PH-like 30..>61 CDD:302622 6/30 (20%)
PDZ_signaling 163..244 CDD:238492 11/80 (14%)
PHsplit_syntrophin <293..351 CDD:269960 15/73 (21%)
SLC9A3R2XP_016879383.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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