DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syn1 and CG42319

DIOPT Version :9

Sequence 1:NP_001262192.1 Gene:Syn1 / 40424 FlyBaseID:FBgn0037130 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster


Alignment Length:198 Identity:45/198 - (22%)
Similarity:77/198 - (38%) Gaps:34/198 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 DNGDRDPCLNNNNNAGDGGGMDMCDVPDHVANQKRHVRIIKSDNNGLGISIKGGRENRMPILISK 193
            ::..:.|.:..:...||..|....||.......|        |::..|..|.||.|..||:.:.:
  Fly    13 ESKSKAPIIKVSCGIGDTDGYPAFDVDSDAYATK--------DDSRWGFLITGGAEFHMPLTVFQ 69

  Fly   194 IFRGMAADQAKGLYVGDAILTVNGEELRDATHDEAVRALKRSGRVVDLEVKFLREVTPYFR---- 254
            :.....||:| |:.:||.||.:|.|:....|..:|...:..:.:.:...::.:.|..|..:    
  Fly    70 VTPNGLADKA-GIRLGDIILEINEEDASQLTLSQAHEKINSTPKKIHFLLRNMEEDDPMGQFEAG 133

  Fly   255 -KASIISEVGWELQRAFLCPLGPGVPTSPPAPKTTPRADTRYIPLQLTHLARNLKYID--PENRC 316
             :.||:..                ||...|.|....||.:  |.::|..:.|.|..|.  |:..|
  Fly   134 EEKSIVMR----------------VPKPLPPPSGRIRASS--IEMRLLEMQRKLSAIAEIPKILC 180

  Fly   317 FEL 319
            ..|
  Fly   181 STL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syn1NP_001262192.1 PH-like 30..>61 CDD:302622
PDZ_signaling 163..244 CDD:238492 20/80 (25%)
PHsplit_syntrophin <293..351 CDD:269960 8/29 (28%)
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 21/82 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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