Protein Alignment Syn1 and Whrn

DIOPT Version :9

• Sequence 1: NP_001262192.1
• Gene: Syn1 / 40424
• FlyBaseID: FBgn0037130
• Length: 627
• Species: Drosophila melanogaster
• Sequence 2: XP_038965801.1
• Gene: Whrn / 313255
• RGDID: 631330
• Length: 969
• Species: Rattus norvegicus
• Alignment Length: 280
• Identity: 73/280 - (26%)
• Similarity: 116/280 - (41%)
• Gaps: 48/280 - (17%)

  Fly   159 ANQKRHVRIIKSDNNGLGISIKGGRENRMPILISKIFRGMAADQAKGLYVGDAILTVNGEELRDA 223
            :..::.|.::..|...||::|:||.|..:.|.|:.:..|..| ::.||.|||.||.|||......
  Rat   273 SGDEKKVNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEA-ESSGLKVGDQILEVNGRSFLSI 336

  Fly   224 THDEAVRALKRSGRVVDLEVKFLREVTPYFR------KASIISEVGWELQRAFLCPLG------- 275
            .|||||:.||.|..:: |.||.:..: |:.|      |....|.:|..:..:...| |
  Rat   337 LHDEAVKLLKSSRHLI-LTVKDVGRL-PHARTTVDQTKWIASSRIGESITNSAGFP-GDLTEEGT 398

  Fly   276 --PGVPTSPPAPKTTPRA---DTRYIPLQLTHLARNLKYIDPENRCFELHSPDGVHSCILRAADS 335
              ||....|...:.|..:   .||.:   |...||:|  :..:.|...::..|......:    |
  Rat   399 NKPGFYKGPAGSQVTLSSLGNQTRAL---LDDQARHL--LTEQERATMMYYLDQYRGGTI----S 454

  Fly   336 AEALVWFNALHSAMGTSTQRALAEANRALTNL--IGELKH------IGWLSKRMSGGGSSGS--- 389
            .||||.  ||...:.|..:.:|....|.:.:.  :....|      |..:..|...|...|.
  Rat   455 VEALVM--ALFELLNTHAKFSLLSEVRGIISPQDLDRFDHLVLRREIESMKARQPPGPGVGDTYS 517

  Fly   390 ----AGGGAASGGSGTSNSV 405
                :..|:::|..|||.:|
  Rat   518 MVSYSDTGSSTGSHGTSTTV 537

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Syn1	NP_001262192.1	PH-like	30..>61	CDD:302622
		PDZ_signaling	163..244	CDD:238492	31/80 (39%)
		PHsplit_syntrophin	<293..351	CDD:269960	15/57 (26%)
Whrn	XP_038965801.1	HN_L-whirlin_R1_like	38..113	CDD:259822
		PDZ_signaling	139..216	CDD:238492
		PDZ_signaling	276..356	CDD:238492	31/81 (38%)
		HN_L-whirlin_R2_like	418..498	CDD:259823	19/90 (21%)
		PDZ_signaling	<908..949	CDD:238492

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3528
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810