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Protein Alignment Syn1 and Pdzd11
DIOPT Version :9
Sequence 1: | NP_001262192.1 |
Gene: | Syn1 / 40424 |
FlyBaseID: | FBgn0037130 |
Length: | 627 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038955522.1 |
Gene: | Pdzd11 / 302422 |
RGDID: | 1560007 |
Length: | 145 |
Species: | Rattus norvegicus |
Alignment Length: | 95 |
Identity: | 32/95 - (33%) |
Similarity: | 49/95 - (51%) |
Gaps: | 11/95 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 163 RHVRIIKSDNNGLGISIKGGRENRMPILISKIFRGMAADQAKGLYVGDAILTVNGEELRDATHD- 226
|.|.:.|.....||.:|:||:.:::.|.|||:.....|.:| ||..||.:|.||..:.:|..|.
Rat 46 RIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRA-GLQEGDQVLAVNDVDFQDIEHSK 109
Fly 227 ----EAVRALKRSGRVVDLEVKFLREVTPY 252
:||..|| :.|.:.:.|:|. ||
Rat 110 LCVFQAVEILK-TAREISMRVRFF----PY 134
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3528 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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