DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syn1 and Slc9a3r1

DIOPT Version :9

Sequence 1:NP_001262192.1 Gene:Syn1 / 40424 FlyBaseID:FBgn0037130 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_036160.1 Gene:Slc9a3r1 / 26941 MGIID:1349482 Length:355 Species:Mus musculus


Alignment Length:358 Identity:76/358 - (21%)
Similarity:121/358 - (33%) Gaps:95/358 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 NGLGISIKGGRENRMPILISKIFRGMAADQAKGLYVGDAILTVNGEELRDATHDEAVRALKRSGR 237
            ||.|..:. |.:.::...|..:..|..|::: ||..||.::.||||.:...||.:.|..::.:..
Mouse    22 NGYGFHLH-GEKGKVGQFIRLVEPGSPAEKS-GLLAGDRLVEVNGENVEKETHQQVVSRIRAALN 84

  Fly   238 VVDLEVKFLREVTPYFRKASIISEVGWELQRAFLCPLGPGVPTSPPAPKTTPRADTRYIPLQLTH 302
            .|.|.|     |.|  .....:.::|..::...|.|........|||...|..|..:. ..:.:|
Mouse    85 AVRLLV-----V
DP--ETDERLKKLGVSIREELLRPQEKSEQAEPPAAADTHEAGDQN-EAEKSH 141

  Fly   303 LARNLK------YIDPENRCFELHSPDGVHSCILRAADSAEALVWFNALHSAMGTSTQRALAEAN 361
            | |.|:      ...|....|.|||........:||.|.       ::...|.|...|..:.|.|
Mouse   142 L-RELRPRLCTMKKGPNGYGFNLHSDKSKPGQFIRAVDP-------DSPAEASGLRAQDRIVEVN 198

  Fly   362 RALTNLIGELKHIGWLSKRMSGGG----------------------------------------- 385
                .:..|.|..|.:...:.|||                                         
Mouse   199 ----GVCMEGKQHGDVVSAIKGGGDEAKLLVVDKETDEFFKKCKVIPSQEHLDGPLPEPFSNGEI 259

  Fly   386 -------------SSGSAGGGAASGGSGTSNSVVAGELVSP----SGRSSSESSDESDKWLPIFV 433
                         |.......|.|..|.||..:.:.:  ||    |...||.||..||..|.:.:
Mouse   260 QKESSREALVEPASESPRPALARSASSDTSEELNSQD--SPKRQVSTEPSSTSSSSSDPILDLNI 322

  Fly   434 AVTEREFRIYES-----APWSVEAWSRPLEIYA 461
            ::...:.|.::.     ||..  .||:..|:::
Mouse   323 SLAVAKERAHQKRSSKRAPQM--DWSKKNELFS 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syn1NP_001262192.1 PH-like 30..>61 CDD:302622
PDZ_signaling 163..244 CDD:238492 20/70 (29%)
PHsplit_syntrophin <293..351 CDD:269960 13/63 (21%)
Slc9a3r1NP_036160.1 PDZ_signaling 12..91 CDD:238492 21/75 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..146 10/37 (27%)
PDZ_signaling 147..226 CDD:238492 19/89 (21%)
EBP50_C 230..355 CDD:286142 22/128 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 244..355 22/114 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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