Sequence 1: | NP_001262192.1 | Gene: | Syn1 / 40424 | FlyBaseID: | FBgn0037130 | Length: | 627 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011538764.1 | Gene: | PATJ / 10207 | HGNCID: | 28881 | Length: | 1937 | Species: | Homo sapiens |
Alignment Length: | 470 | Identity: | 102/470 - (21%) |
---|---|---|---|
Similarity: | 166/470 - (35%) | Gaps: | 127/470 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 ESSSLGRTPPAAQQPIPQQHSPSPSGLRCGNMETRVRGAWYRVLVTLETDFLA-------VSLDE 60
Fly 61 SCEAAQPSNDGQSTTLNGTLGSNHSGGGGGGAGGGGTGGGGQNGTLPNSAS-------------- 111
Fly 112 -LQGMN---IQDTELDGSASNDN----GDRDPCLNN---NNNAGDGGGMDMCDVPDHVA----NQ 161
Fly 162 KRHVR-----------IIKSDNNGLGISIKGGRENRMPILISKIFRGMAADQAKGLYVGDAILTV 215
Fly 216 NGEELRDATHDEAVRALKRSGRVVDLEVKFLREVTPYFRKASIISEVGWELQRAFLCPLGPGVPT 280
Fly 281 SPPAPKTTPRADTRYIPLQLTHLARNLKYIDPENRCFELHSPDGVHSCILRAADSAEALVWFNAL 345
Fly 346 HSAMGTSTQRALAEANRALTNLIGELKHIGWLSKRMSGGGSSGSAGGG--------AASGGSGTS 402
Fly 403 NSVVAGE-LVSPSGR 416 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Syn1 | NP_001262192.1 | PH-like | 30..>61 | CDD:302622 | 4/37 (11%) |
PDZ_signaling | 163..244 | CDD:238492 | 34/91 (37%) | ||
PHsplit_syntrophin | <293..351 | CDD:269960 | 5/57 (9%) | ||
PATJ | XP_011538764.1 | L27_2 | 8..65 | CDD:117611 | |
PDZ_signaling | 135..218 | CDD:238492 | |||
PDZ_signaling | 246..325 | CDD:238492 | |||
PDZ_signaling | 366..450 | CDD:238492 | |||
PDZ_signaling | 570..634 | CDD:238492 | |||
PDZ | 683..772 | CDD:214570 | |||
PDZ_signaling | 1066..1157 | CDD:238492 | |||
PDZ | 1236..1321 | CDD:214570 | |||
PDZ | 1459..1574 | CDD:214570 | 22/117 (19%) | ||
PDZ_signaling | 1586..1666 | CDD:238492 | 31/80 (39%) | ||
PDZ_signaling | 1729..1814 | CDD:238492 | 17/71 (24%) | ||
PDZ_signaling | 1852..1936 | CDD:238492 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |