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Protein Alignment Rpb8 and NRPB8B
DIOPT Version :9
Sequence 1: | NP_649352.1 |
Gene: | Rpb8 / 40415 |
FlyBaseID: | FBgn0037121 |
Length: | 149 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_191519.1 |
Gene: | NRPB8B / 825129 |
AraportID: | AT3G59600 |
Length: | 146 |
Species: | Arabidopsis thaliana |
Alignment Length: | 144 |
Identity: | 68/144 - (47%) |
Similarity: | 101/144 - (70%) |
Gaps: | 3/144 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 VLFEDIFNVKDMDPEGKKFDRVSRLHCESESFKMDLILDINSWLYPMELGDKFRLVLATTLREDG 68
::|||||.|..:||:|||||:|:|:...|.:.:|.:.||:|:.:||:.:||||.|.:|.||..||
plant 6 IMFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPLAVGDKFTLAMAPTLNLDG 70
Fly 69 CPDSGEYNPMEHEGTRADSFEYVMYGKIYRIEGDEAHNEASRLSAYVSFGGLLMRLQGDANNLHG 133
.||:|.:.|...: |.||.:||:|:||:|:| .|...:..:...|||||||||.||||..::..
plant 71 TPDTGYFTPGAKK-TLADKYEYIMHGKLYKI--SERDGKTPKAELYVSFGGLLMLLQGDPAHISH 132
Fly 134 FEVDQHMYLLMKRL 147
||:||.::|||::|
plant 133 FELDQRLFLLMRKL 146
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
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