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Protein Alignment Rpb8 and Polr2h
DIOPT Version :9
Sequence 1: | NP_649352.1 |
Gene: | Rpb8 / 40415 |
FlyBaseID: | FBgn0037121 |
Length: | 149 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001128261.1 |
Gene: | Polr2h / 498109 |
RGDID: | 1561203 |
Length: | 150 |
Species: | Rattus norvegicus |
Alignment Length: | 150 |
Identity: | 117/150 - (78%) |
Similarity: | 133/150 - (88%) |
Gaps: | 1/150 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MAGVLFEDIFNVKDMDPEGKKFDRVSRLHCESESFKMDLILDINSWLYPMELGDKFRLVLATTLR 65
|||:||||||:|||:|||||||||||||||||||||||||||:|..:||::||||||||:|:||.
Rat 1 MAGILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVIASTLY 65
Fly 66 EDGCPDSGEYNPMEHEGTRADSFEYVMYGKIYRIEGDEAHNE-ASRLSAYVSFGGLLMRLQGDAN 129
|||..|.|||||.:...:|||.||||||||:|||||||...| |:|||||||:||||||||||||
Rat 66 EDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGGLLMRLQGDAN 130
Fly 130 NLHGFEVDQHMYLLMKRLAF 149
||||||||..:|||||:|||
Rat 131 NLHGFEVDSRVYLLMKKLAF 150
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
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