DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11247 and ZNF140

DIOPT Version :9

Sequence 1:NP_001097659.1 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_011533135.1 Gene:ZNF140 / 7699 HGNCID:12925 Length:458 Species:Homo sapiens


Alignment Length:433 Identity:127/433 - (29%)
Similarity:175/433 - (40%) Gaps:66/433 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SVSKEDAVSLLTDSGISLSSPPAARESSPGPTLAIKRRKSSLASLRDACVDEEEDDGGEQDSKDD 71
            |:||.|.||||              |....|.|..:..|..|.|:.::  ..|..|...::...|
Human    49 SISKPDVVSLL--------------EQGKEPWLGKREVKRDLFSVSES--SGEIKDFSPKNVIYD 97

  Fly    72 DYVQPQLKKSARKGEPV--------KRKHHV---------------------------------- 94
            |..|..:.:......||        |.|.|.                                  
Human    98 DSSQYLIMERILSQGPVYSSFKGGWKCKDHTEMLQENQGCIRKVTVSHQEALAQHMNISTVERPY 162

  Fly    95 -CSQCSKEFGGKTDLQRHMLIHSDERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKS 158
             |.:|.|.||.:..|..|...|:.|:|:.||:|||::.|..||..| ...|..:|...|..|.|:
Human   163 GCHECGKTFGRRFSLVLHQRTHTGEKPYACKECGKTFSQISNLVKH-QMIHTGKKPHECKDCNKT 226

  Fly   159 FALKERLRLHMRLHSGEKPYPCDLCDKKFARGGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANL 223
            |:....|..|.|.|:|||||.|..|.|.|:|...|.:|...|  ...:|:.|.||..:||:.:.|
Human   227 FSYLSFLIEHQRTHTGEKPYECTECGKAFSRASNLTRHQRIH--IGKKQYICRKCGKAFSSGSEL 289

  Fly   224 RVHMERHEQGMEHRCSICENQFANELALRAHINQEHHKLTQFECEICHKMIEPDEDLATHMQRHT 288
            ..|...|.....:.|..|...|.....|..| ...|...|.:||..|.|.......|..|.:.|.
Human   290 IRHQITHTGEKPYECIECGKAFRRFSHLTRH-QSIHTTKTPYECNECRKAFRCHSFLIKHQRIHA 353

  Fly   289 AVKTHVCEVCNTYFTQKSQYNVHMRMHTGERPYQCRICHQTFAHSSVLKLHIRKHTGEKPFRCQL 353
            ..|.:.|:.|...||..:....|.:.||||:||.|..|.:.|:.|..|.||.|.||||||:.|::
Human   354 GEKLYECDECGKVFTWHASLIQHTKSHTGEKPYACAECDKAFSRSFSLILHQRTHTGEKPYVCKV 418

  Fly   354 CEDEVAFSQLAHLKNHMKKIHKQQKPYMCEGCHDFFKIKVELQ 396
            |..  :||..::|..| ::.|....||..|...::.....|.|
Human   419 CNK--SFSWSSNLAKH-QRTHTLDNPYEYENSFNYHSFLTEHQ 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_001097659.1 COG5048 <88..247 CDD:227381 58/201 (29%)
C2H2 Zn finger 95..115 CDD:275368 7/19 (37%)
zf-H2C2_2 107..132 CDD:290200 10/24 (42%)
C2H2 Zn finger 123..144 CDD:275368 9/20 (45%)
C2H2 Zn finger 152..172 CDD:275368 7/19 (37%)
zf-H2C2_2 165..189 CDD:290200 13/23 (57%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
COG5048 <192..369 CDD:227381 57/176 (32%)
C2H2 Zn finger 210..230 CDD:275370 7/19 (37%)
C2H2 Zn finger 238..260 CDD:275371 5/21 (24%)
C2H2 Zn finger 267..287 CDD:275368 5/19 (26%)
C2H2 Zn finger 295..315 CDD:275368 5/19 (26%)
zf-H2C2_2 309..332 CDD:290200 10/22 (45%)
C2H2 Zn finger 323..343 CDD:275368 8/19 (42%)
C2H2 Zn finger 351..374 CDD:275368 6/22 (27%)
C2H2 Zn finger 382..399 CDD:275368 3/15 (20%)
ZNF140XP_011533135.1 KRAB 6..66 CDD:214630 9/30 (30%)
KRAB 6..45 CDD:279668
COG5048 160..>453 CDD:227381 101/299 (34%)
C2H2 Zn finger 164..184 CDD:275368 7/19 (37%)
zf-H2C2_2 176..201 CDD:290200 10/24 (42%)
C2H2 Zn finger 192..212 CDD:275368 9/20 (45%)
zf-H2C2_2 204..229 CDD:290200 9/25 (36%)
C2H2 Zn finger 220..240 CDD:275368 7/19 (37%)
zf-H2C2_2 233..257 CDD:290200 13/23 (57%)
C2H2 Zn finger 248..268 CDD:275368 7/19 (37%)
zf-H2C2_2 260..285 CDD:290200 8/26 (31%)
C2H2 Zn finger 276..296 CDD:275368 7/19 (37%)
zf-H2C2_2 288..313 CDD:290200 6/24 (25%)
C2H2 Zn finger 304..324 CDD:275368 5/20 (25%)
C2H2 Zn finger 332..352 CDD:275368 5/19 (26%)
C2H2 Zn finger 360..380 CDD:275368 5/19 (26%)
zf-H2C2_2 372..397 CDD:290200 10/24 (42%)
C2H2 Zn finger 388..408 CDD:275368 8/19 (42%)
zf-H2C2_2 400..424 CDD:290200 12/25 (48%)
C2H2 Zn finger 416..436 CDD:275368 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.