DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11247 and Sry-beta

DIOPT Version :10

Sequence 1:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_524579.1 Gene:Sry-beta / 43570 FlyBaseID:FBgn0003511 Length:356 Species:Drosophila melanogaster


Alignment Length:378 Identity:87/378 - (23%)
Similarity:128/378 - (33%) Gaps:112/378 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRSRRSVSKEDAVSLL----TDSGISLSSPPAARESSPGPTLAIKRRKSSLASLRDACVDEEED 61
            :||:...|.::.|.:||    .:.........|.|.....|...|         ::...:.|.|.
  Fly    72 LVRNLSQVQRQIADALLGCRQVEGKAETKQQAAKRARVQVPAFKI---------VQATALKEPER 127

  Fly    62 DGGEQDSKDDDYVQPQLKKSARKGEP------------VKRKHHVCSQCSKEFGGKTDLQRHMLI 114
            ..||:|..::...:..|.:..:..||            .:.....|..|.:.|..:..|:||:  
  Fly   128 QPGEEDECEEFMKEEMLDEEFQFSEPDDSMPSSEEEFFTETTEIPCHICGEMFSSQEVLERHI-- 190

  Fly   115 HSDERPHKCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFALKERLRLHMRLHSGEKPYP 179
                   |...|.||                  :|..|:.|.......|.|.|||.||.|:....
  Fly   191 -------KADTCQKS------------------EQATCNVCGLKVKDDEVLDLHMNLHEGKTELE 230

  Fly   180 CDLCDKKFARGGQLQQHMVSHHKTSIQQFNCTKCSASFSTNANLRVHMERHEQGMEHRCSICENQ 244
            |..|||||:....:.:||..|...  :::.|.||...||.:..:..|:.||:             
  Fly   231 CRYCDKKFSHKRNVLRHMEVHWDK--KKYQCDKCGERFSLSWLMYNHLMRHD------------- 280

  Fly   245 FANELALRAHINQEHHKLTQFECEICHKMIEPDEDLATHMQRHTAVKTHVCEVCNTYFTQKSQYN 309
             |.|.||                                          :||||:..|..|..|.
  Fly   281 -AEENAL------------------------------------------ICEVCHQQFKTKRTYK 302

  Fly   310 VHMRMHTGERP-YQCRICHQTFAHSSVLKLHIRKHTG-EKPFRCQLCEDEVAF 360
            .|:|.|..:|| |.|..|.::|.....||:|.|.|.. |||...:..|..|.|
  Fly   303 HHLRTHQTDRPRYPCPDCEKSFVDKYTLKVHKRVHQPVEKPESAEAKEATVTF 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 38/158 (24%)
C2H2 Zn finger 95..115 CDD:275368 6/19 (32%)
C2H2 Zn finger 123..144 CDD:275368 3/20 (15%)
C2H2 Zn finger 152..172 CDD:275368 7/19 (37%)
C2H2 Zn finger 180..200 CDD:275368 8/19 (42%)
COG5048 <192..369 CDD:227381 42/171 (25%)
C2H2 Zn finger 210..230 CDD:275370 6/19 (32%)
C2H2 Zn finger 238..260 CDD:275371 4/21 (19%)
C2H2 Zn finger 267..287 CDD:275368 0/19 (0%)
C2H2 Zn finger 295..315 CDD:275368 9/19 (47%)
C2H2 Zn finger 323..343 CDD:275368 7/19 (37%)
C2H2 Zn finger 351..374 CDD:275368 3/10 (30%)
C2H2 Zn finger 382..399 CDD:275368
Sry-betaNP_524579.1 C2H2 Zn finger 203..223 CDD:275368 7/19 (37%)
C2H2 Zn finger 231..251 CDD:275368 8/19 (42%)
C2H2 Zn finger 259..308 CDD:275368 21/104 (20%)
C2H2 Zn finger 288..303 CDD:275370 7/14 (50%)
zf-C2H2 315..337 CDD:395048 8/21 (38%)
C2H2 Zn finger 317..337 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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